Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq342 100 3e-16 >seq342 Length=727325 Score = 100 bits (110), Expect = 3e-16 Identities = 348/541 (64%), Gaps = 4/541 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| ||||||||| |||||||||| ||||| |||||||| || || |||| Sbjct 61617 AACTACAATTACTTTGGCTTCAAAACTTTGGAGCGTTCGTACCTTCTTCGCATCAATGGA 61558 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||||| || || || |||| ||||| || || |||| ||||| || | Sbjct 61557 AAAGTTGCTGAGCGTCCTCAGCATATGCTTATGCGTGTGGCTGTCGGAATTCATGGAGAG 61498 Query 93835 GACATGCCGA--ATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGG 93892 || || ||| | ||| | | | | | || | ||| | |||| | Sbjct 61497 GA--TGTCGACAAGGTTATCGAGACATATAACCTCACGTCTTCAAAGTATTTTACCCATG 61440 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | | || || || ||||| || || || || ||| || | || || |||||| || Sbjct 61439 CTTCGCCTACTCTCTTCAATGCAGGCACACCATCGCCTCAACTCTCGTCCTGTTTCTTGG 61380 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | || | || | ||||| || || |||| ||| | ||| ||| |||||| | | Sbjct 61379 TTACTATGAAAGGGGACTCGATTGATGGTATTTACGATACCCTTAAGACCTGTGCTATGA 61320 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 | |||||| || || || || || ||| | ||| | | ||||| | ||||||| Sbjct 61319 TTTCAAAAACTGCTGGCGGTATTGGACTCAACATTCACTGCATTCGTGCTACTGGTTCCT 61260 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 | || ||| |||||||| | || |||||| | || || ||| | | || || || Sbjct 61259 ATATTGCCGGGACCAATGGTAGTTCTAACGGCATTGTGCCAATGTTAAGAGTGTTTAATC 61200 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 | | || | || || |||||||| || | ||| || | || || |||| Sbjct 61199 ATACCGCCAGGTATGTTGACCAGGGAGGCAACAAGAGACCCGGGGCCTTTGCTATCTACA 61140 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| ||||||||||| | | |||||| ||| || | ||||| || ||||| | Sbjct 61139 TGGAGCCATGGCACGCGGATATATTCGATTTCATTGACTTGAGGAAGAATCATGGCAAGG 61080 Query 94253 A 94253 | Sbjct 61079 A 61079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720738752080