Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq383 111 1e-19 seq320 93.3 4e-14 seq340 91.5 1e-13 seq98 84.2 2e-11 >seq383 Length=466833 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| ||||| ||||| | || || ||| || |||||||| || || Sbjct 193689 GTCGACTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCCTCTAGCTGCTTACCG 193630 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||| || || || || ||||| ||||| ||| || || ||| Sbjct 193629 GCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGAATCTTACCCTTC 193570 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| || |||| | |||||| |||| || | ||||| ||||| || || Sbjct 193569 ACGTTGT-CGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTTACCGGTAAGGGT 193511 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| |||||||||||||| Sbjct 193510 TTTGACAAAAATCTGCAT 193493 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| |||| || ||||| ||||| ||||| || |||| | Sbjct 193947 CCACCACGAAGACGGAGAACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTC 193888 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || | ||| || ||||| |||| | || || ||||| || || Sbjct 193887 AAAGTACGTCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGG 193828 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||| ||| |||||| ||||| ||||| | | || || | | ||||| Sbjct 193827 ATACCCTCCTTATCCTGGATTTTACCCTTGACGTTGT-CAATAGTATCGGAAGATTCGAC 193769 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || || || ||||| |||||||||||||| Sbjct 193768 TTCCAAAGTAATGGTTTTTCCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 >seq320 Length=806987 Score = 93.3 bits (102), Expect = 4e-14 Identities = 106/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| ||||| || |||||||| | ||||| || || ||||| |||||| Sbjct 610485 GTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCCGTCCTCAAGCTGCTTTCCA 610544 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| || |||||||| ||||| || |||||||||||| || || |||| Sbjct 610545 GCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGAATCTTAGACTTG 610604 Query 127037 A-GTTGTTCGACGGTGTCCG 127055 | |||| |||| ||||||| Sbjct 610605 ACGTTG-TCGATAGTGTCCG 610623 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || |||||||| ||||| || |||||| | || ||| ||| || Sbjct 610190 ACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGGGTACGACCATCCTCA 610249 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || || || || ||| | ||||| |||||||| || || || ||||||||||| ||| | Sbjct 610250 AGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGG 610309 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | || | || || | | ||| || |||| ||| | || ||| Sbjct 610310 ATCTTTGACTTGACATTGTCAATAGTATCAGAAGACTCCACCTCGAGGGTGATTGTCTTG 610369 Query 127085 CCGGT 127089 || || Sbjct 610370 CCAGT 610374 >seq340 Length=732193 Score = 91.5 bits (100), Expect = 1e-13 Identities = 227/341 (67%), Gaps = 13/341 (4%) Strand=Plus/Minus Query 47244 AACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC 47303 |||||||| ||||| | ||||| ||||| ||||| |||| |||||||| | | |||| Sbjct 107711 AACGAGCTCATCTCCCGCGACGAGGGCCTCCACACTGACTTCGCCTGTCTGTTGTTCAAC 107652 Query 47304 ACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCAGC----GACATGTTTGCCGAAGC 47359 | | || ||| | | | | || | | | || || ||| ||| || Sbjct 107651 C----ACTTGAACAACCGCC---CTTCTCAACAGGCTGTTCAAGATATCATTGTCGAGGC 107599 Query 47360 CGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAA 47419 || | ||||||| || || || | || ||||| || || | |||| ||||| Sbjct 107598 TGTTGGCATTGAGCAAGAATTCTTGACTGAAGCTCTTCCTTGTGCTCTTTTGGGCATGAA 107539 Query 47420 CGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAA 47479 | | || | |||| |||| || |||||||| |||||||| || || | || Sbjct 107538 CTCTAAGCTCATGAAGCAGTATATTGAATTTGTTGCCGACCGTCTTCTGTTGTCTCTCG- 107480 Query 47480 GTATCCCAA-GATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCG 47538 ||| ||||| | ||||| | || || |||||||| |||||| | ||||| || | Sbjct 107479 GTAACCCAAAGTTTTACAATGCCACTAACCCATTCGACTTTATGGAGTCTATTTCTCTTG 107420 Query 47539 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATAT 47579 ||||| |||||||| ||||||||||| ||||| || ||| Sbjct 107419 CCGGCAAAACCAACTTCTTCGAGAAGCGTGTCGGAGACTAT 107379 >seq98 Length=1126903 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || || || || ||||| | ||||| | ||||||||| ||||| || |||||||| Sbjct 1023257 ATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATCCCCTCCTT 1023316 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || |||||| ||||| | || | || || | ||||| || || | ||| | Sbjct 1023317 ATCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCTCCAAGGTGAT 1023376 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||||| ||| || || ||||||||||| Sbjct 1023377 GGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCAT 1023412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498434383520