Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq320 127 2e-24 seq383 120 3e-22 >seq320 Length=806987 Score = 127 bits (140), Expect = 2e-24 Identities = 175/242 (72%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | | || ||||| || || || ||||| || || || ||||| Sbjct 609941 ATTCCACCACGAAGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCA 610000 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | || ||||| ||| | ||||||||||||||||| || Sbjct 610001 GAGAGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGA 610060 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || |||||||| ||||| |||| || | || | |||||| || ||||| Sbjct 610061 GGAATACCCTCCTTATCTTGGATTTTCGACTTGA-CGTTGTCAATGGTGTCCGAGGACTC 610119 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACC 45349 ||| ||||| || | || |||||||||| || || ||||| |||||||| ||| || Sbjct 610120 GACCTCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCATTCCGCCACG 610179 Query 45350 AA 45351 || Sbjct 610180 AA 610181 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || || || || || ||||||||| | || | ||| ||||| || Sbjct 609740 TGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTCCAACTGC 609799 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||| || |||||||| || ||||| || || ||||| ||||| || Sbjct 609800 TTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTC 609859 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | ||||| |||||||| || ||||| || | || || ||||| Sbjct 609860 GACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTTCCGGTC 609919 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | |||||| || ||||||||||| Sbjct 609920 AAAGTTTTAACGAAAATTTGCAT 609942 >seq383 Length=466833 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || |||||||||||||||||||| || | ||| | || || Sbjct 193701 ACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCCTCT 193642 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || ||| | || | || || ||||| || || |||||||| ||||| ||| Sbjct 193641 AGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGA 193582 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || | || | || | || || ||||||||||| |||||||||| ||||| Sbjct 193581 ATCTTACCCTTCA-CGTTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTT 193523 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || ||||| |||||||| ||||| Sbjct 193522 ACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || ||||| ||||||||||||||||| ||||| | || ||| ||||| || Sbjct 193923 TGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTCAAAGTACGTCCATCCTCCAACTGC 193864 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | ||||| || || || || || || || ||||| || ||||| Sbjct 193863 TTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGGATACCCTCCTTATCCTGGATTTTA 193804 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | || |||||||| |||||||| | ||||| ||||| || || Sbjct 193803 CCCTTGA-CGTTGTCAATAGTATCGGAAGATTCGACTTCCAAAGTAATGGTTTTTCCAGT 193745 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| |||||||| ||||| Sbjct 193744 AAGGGTTTTGACAAAAATCTGCAT 193721 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || || || || || || || ||| || |||| | ||| ||| Sbjct 193473 ACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCC 193414 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 ||||| || || || |||||| |||||||| || || |||||||| || || |||||| Sbjct 193413 AATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCTTGA 193354 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| ||||| || | ||||| |||||||||||||| ||||| | || || Sbjct 193353 ATTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTGTCTTT 193294 Query 45312 CCGGT 45316 ||||| Sbjct 193293 CCGGT 193289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000951284080