Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq342 118 1e-21 >seq342 Length=727325 Score = 118 bits (130), Expect = 1e-21 Identities = 361/555 (65%), Gaps = 15/555 (3%) Strand=Plus/Plus Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-- 116313 |||||| ||||| | |||| || | ||| ||| | ||| || | ||| ||| Sbjct 60460 ACCTTGAACACCAACACCAACAGGTCTATGCCTCGTGTTACTTTTCCTAGC---CTCAGG 60516 Query 116314 -ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 116372 |||||||| || || |||||| | | | || || |||||| |||| ||||| || | Sbjct 60517 GACGGGATAGAAGTTGACATCGATGATCTTGTTGAGGTTTTTGATGACGACCTTGGTCAC 60576 Query 116373 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 116432 || || | ||| || |||| | || ||| ||| ||||| |||| | ||| Sbjct 60577 CTCGTGCAACTTGGCGAAATCGTACTCGCCCCTCTGAACATCAACATATGTAGGCAAGGC 60636 Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492 | || |||| |||||| || | | |||||| || | ||||| | ||| || || Sbjct 60637 CAACGATGCCAAATTACAAACTGCGACCTCATCAGGTGCACTATACTCCACAATCTCGGT 60696 Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552 ||| | ||| || ||||||| |||||||||| || || || || |||||| || Sbjct 60697 ACAGAGATTGGACGATCTAATGGTTCCCAAGTTCTGCTGGTTGGATTTGCGGTTACATGC 60756 Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 |||||||||||||| | || | || ||||| ||||||| | |||||| | ||| Sbjct 60757 GTCCTTGTAGAGCATGAAAGGGTTGCCAGTCTCAGTTTGGGCTTCGAGAATGTGATACCA 60816 Query 116613 TACATCGGCGGCTGGCACAGTGGCGTTG---GCTCGCCCCT---CCTCCTCGTACTTTGT 116666 | | ||| | ||| ||| || | | | | ||| || || | Sbjct 60817 GAGTTTTTGCGCTTTGA---TGGTCTTGCGAGCAAGGTCTTTAGTATTCTCATATTTGTT 60873 Query 116667 GTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACA 116726 ||||| ||||| || ||||||||| | | || | | ||||| || | || ||||| Sbjct 60874 ATAGAGAGCCTCGAATTCTTCACCCCAAACGTCGGCCAAACCTGGGGCTTCATTAGGACA 60933 Query 116727 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 116786 ||||| ||| | || ||||||| | ||||||||| || || |||||||| || Sbjct 60934 AAAGAGGCTCCACTCGGCATTTGCCTCAACTCTCTTCATGAATAGATCAGGGATCCAAAG 60993 Query 116787 CGCCGAGAAGAGATC 116801 || |||| | ||| Sbjct 60994 AGCGTAGAACAAATC 61008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504147801680