Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq383 129 1e-24 seq342 109 1e-18 seq320 102 2e-16 seq349 89.7 1e-12 >seq383 Length=466833 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| |||||||||||||||| || || ||| ||| || | || || Sbjct 193704 AGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCC 193645 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| || ||||| ||||| || || ||||| ||| Sbjct 193644 TCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCC 193585 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| || || | | || || || | || || || Sbjct 193584 TGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTT 193525 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || ||||| |||||||| || Sbjct 193524 TTACCGGTAAGGGTTTTGACAAAAATCTG 193496 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||||||||| || || || ||||| || |||| || ||||| | | ||| Sbjct 193193 CGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTG 193134 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| ||||| || |||||||| || | |||||||||||| ||| ||| ||| Sbjct 193133 CGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCT 193074 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| |||||| |||| |||||| | | || || ||||| Sbjct 193073 TCTTTGTCTTGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACCTCCAAA 193014 Query 199589 GTGATCGTCTTACCCGT 199605 ||||| ||||| || || Sbjct 193013 GTGATGGTCTTTCCGGT 192997 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| ||||||||||||| || ||||| |||||| Sbjct 193941 CGAAGACGGAGAACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTCAAAGTA 193882 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| |||| |||||| || || ||||| ||||| || || || || || || Sbjct 193881 CGTCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGGATACCC 193822 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || ||| ||| || | || || | | ||| || ||||| Sbjct 193821 TCCTTATCCTGGATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATTCGACTTCCAAA 193762 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| |||||||| || Sbjct 193761 GTAATGGTTTTTCCAGTAAGGGTTTTGACAAAAATCTG 193724 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || ||||| || || | ||||||||| | | || || |||||| Sbjct 193476 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCT 193417 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||| ||||| || || ||||| ||||| || ||| ||| || || || Sbjct 193416 TCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCT 193357 Query 199538 TGAATCTTTTGC--TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 |||| |||||| || || |||| ||||| | | || || || | ||||| | Sbjct 193356 TGAA--TTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTG 193299 Query 199596 TCTTACCCGT 199605 |||| || || Sbjct 193298 TCTTTCCGGT 193289 >seq342 Length=727325 Score = 109 bits (120), Expect = 1e-18 Identities = 205/297 (69%), Gaps = 7/297 (2%) Strand=Plus/Plus Query 167733 TTCCCGTGTGCTTTTGGTTATTTTTGCGGC-ATATGGCGTCCTTGTAGACGATGAAGGGC 167791 ||||| || || ||||| ||||||| | ||| |||||||||||| ||||| || Sbjct 60720 TTCCCAAGTTCTGCTGGTTGGATTTGCGGTTACATG-CGTCCTTGTAGAGCATGAAAGGG 60778 Query 167792 ATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGCCAAAGTTCTTGGGCTTTTACGGTA 167851 | ||| ||| | ||| || | | |||||| | ||| |||| ||| ||||| | ||| Sbjct 60779 TTGCCAGTCTCAGTTTGGGCTTCGAGAATGTGATACCAGAGTTTTTGCGCTTTGATGGTC 60838 Query 167852 GTTCTCGC----TCTTCCTTCTTTTTCGTATCTCTCATAGAGGTCTTCGAAATCCTTCCC 167907 | | || |||| | || | | ||| | | |||||| | ||||| || | || Sbjct 60839 TTGCGAGCAAGGTCTTTAGTATTCT-CATATTTGTTATAGAGAGCCTCGAATTCTTCACC 60897 Query 167908 GTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAGAGACTCCAATTTCCATCGGT 167967 ||| ||| | | ||| || ||||| || ||||||||||| ||||| | ||| | Sbjct 60898 CCAAACGTCGGCCAAACCTGGGGCTTCATTAGGACAAAAGAGGCTCCACTCGGCATTTGC 60957 Query 167968 CTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCGTAGAACAATTGCCTTGC 168024 ||| || ||||||||||| || || | |||||| ||||||||||| | ||||| Sbjct 60958 CTCAACTCTCTTCATGAATAGATCAGGGATCCAAAGAGCGTAGAACAAATCTCTTGC 61014 >seq320 Length=806987 Score = 102 bits (112), Expect = 2e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| || || || ||||||||||||| |||||| || | | || Sbjct 610461 CGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTG 610520 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| || || ||||||||||| || ||||| | ||| ||||| || ||| |||||| Sbjct 610521 CGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCC 610580 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| |||| ||||| | | ||| || || | Sbjct 610581 TCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGG 610640 Query 199589 GTGATCGTCTTACCCGTGA 199607 || || || || || |||| Sbjct 610641 GTAATGGTTTTTCCAGTGA 610659 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| ||||| || || || || |||||||| || | |||||| |||| | || Sbjct 609950 CGAAGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTA 610009 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||||||||| |||||||| | || |||||||| ||| ||| || Sbjct 610010 CGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCC 610069 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || || ||| ||| || | |||||| | | || || || | Sbjct 610070 TCCTTATCTTGGATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGG 610129 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || || ||||| ||||| Sbjct 610130 GTGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTG 610167 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || ||||| || || | ||| || || | | ||| Sbjct 609722 CGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTA 609781 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| |||||| || || ||||| | ||||||||||| ||| ||| || Sbjct 609782 CGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCC 609841 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| ||||| | | || || || | Sbjct 609842 TCCTTATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAGG 609901 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | |||||| || |||||||| Sbjct 609902 GTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTG 609939 >seq349 Length=649591 Score = 89.7 bits (98), Expect = 1e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501 ||||||| ||||||||| | | ||||||||||| || |||||||||||||||||||| Sbjct 305985 TTTTGGATGTTGTAGTCCGAAAGGGTCCTTCCATCCTCTAGCTGCTTTCCGGCGAAGATC 306044 Query 199502 AGACGCTGCTGGTCCGG 199518 | |||||||||||| || Sbjct 306045 AAACGCTGCTGGTCTGG 306061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178915588236666