Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq383 104 3e-17 seq320 98.7 1e-15 >seq383 Length=466833 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| || ||||| | ||| ||| || |||||||| |||||||| ||||||||| | Sbjct 193188 ACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCC 193129 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||| || |||||||| ||||| ||||||||||| | || | | || || Sbjct 193128 ATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCTTT 193069 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| |||| | | | | ||||| || || || |||| ||||| Sbjct 193068 GTCTTGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACCTCCAAAGTGAT 193009 Query 46558 GGTTTTGCCCGT 46569 ||| || || || Sbjct 193008 GGTCTTTCCGGT 192997 >seq320 Length=806987 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||||||||| ||||| || || || ||||| |||| || Sbjct 610473 ACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCCGTCCTCA 610532 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || ||||| || ||||| || | || | | |||||||||| Sbjct 610533 AGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGA 610592 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||||| ||| | | | ||||| ||||||||| || | || |||||||| Sbjct 610593 ATCTTAGACTTGA-CGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATGGTTTT 610651 Query 46564 GCCCGT 46569 || || Sbjct 610652 TCCAGT 610657 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || || || || || ||||| ||||| || | || || | |||||| || || || Sbjct 609751 CTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTCCAACTGCTTACCAGCAAA 609810 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||| | || | | |||||| ||| |||||| ||||| | Sbjct 609811 GATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGACTTGACATT 609870 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || ||||| || | ||||| || || || |||| |||||||| Sbjct 609871 GTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTTCCGGTCAAAGTTTTAAC 609930 Query 46582 AAAGATTTGCATT 46594 || ||||||||| Sbjct 609931 GAAAATTTGCATT 609943 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| || || ||||| || || || || || | || || Sbjct 609962 ACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCA 610021 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || ||||| ||||| || |||||||| | || | | |||||| || | Sbjct 610022 AGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGG 610081 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCG-TGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 || ||| ||||| ||| | || | |||| || || || || | ||||| || || Sbjct 610082 ATTTTCGACTTGA-CGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTT 610140 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||| || | || || ||||||||||||||| Sbjct 610141 GCCGGTTAAGGTCTTGACAAAGATTTGCATT 610171 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || || || || || ||||| || || || | || || || |||||||||||||| Sbjct 610207 CTCTTTCTGAATGTTATAATCGGAAAGGGTACGACCATCCTCAAGTTGCTTGCCGGCGAA 610266 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 ||||||||||||||||| | || | || |||||| ||| |||||| ||||| Sbjct 610267 AATCAAGCGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTTGACTTGA 610322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565235587938960