Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq383 84.2 2e-11 >seq383 Length=466833 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || ||||| || || |||| |||||| | | Sbjct 193493 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCG 193552 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | || || | || || || || || ||| | ||||| Sbjct 193553 GATACGATCGACAACG-TGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCA 193611 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| || || ||||| || |||| || ||| | | || || || Sbjct 193612 ACAGCGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTACCTTGAGTGATTATAA 193671 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| |||| || || | || || ||| || |||| || Sbjct 193672 TATCCAAAAGGAGTCGACCCTCCACCTTGTCCTTCGTCTGCGAGGTGG 193719 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || |||||||| || | || ||||| | || Sbjct 193721 ATGCAGATTTTTGTCAAAACCCTTACTGGAAAAACCATTACTTTGGAAGTCGAATCTTCC 193780 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | ||||||| || || ||||| || ||| | || || Sbjct 193781 GATACTATTGACAACG-TCAAGGGTAAAATCCAGGATAAGGAGGGTATCCCCCCAGATCA 193839 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | || || || ||| |||| || | || || | | |||||| || Sbjct 193840 ACAACGTCTTATCTTTGCTGGTAAGCAGTTGGAGGATGGACGTACTTTGAGCGACTATAA 193899 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||| | || || || ||||| || ||| Sbjct 193900 TATCCAAAAGGAGTCAACTCTACACTTGGTTCTCCGT 193936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170311640320