Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq10 273 3e-68 seq378 93.3 5e-14 seq363 93.3 5e-14 >seq10 Length=387623 Score = 273 bits (302), Expect = 3e-68 Identities = 562/831 (68%), Gaps = 10/831 (1%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 || || || ||||| | || ||||| ||||| || || ||||| || || | ||||| Sbjct 243989 ATAGCCGCCTGGACGGCAGCACCGTAGGCGACAGCTTCGTCGGGATTGATGGACTTATTG 244048 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || || || ||| | || || | || | || | || ||||| || || || Sbjct 244049 GGCTCCTTCCCATTGAAAAAGTCGGACACCAGCTTCTGGACCTTGGGGATACGGGTAGAA 244108 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 ||||| ||||| || || || | || ||||||||||| ||||| ||||| Sbjct 244109 CCACCAACCAAGACAATCTCGTGGACGGAACTCTTATCGATCTTAGAGTCACGAAGGACA 244168 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 ||||| || |||||| ||||| | ||| |||| || || ||||| ||| Sbjct 244169 CGCTCGACGGGCTCCATAGTGGAGCGGAAGAGATCCTGGCACAACTCTTCGAAACGAGCA 244228 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 || || || || || |||||||||| || || || | ||||||||||| |||| ||| Sbjct 244229 CGAGTGATCGAGGTGTAGAAATCAATACCCTCATAGAGAGAATCAATTTCGATGGAGGTT 244288 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | || || | || ||||| || || || || || || || | ||| || || Sbjct 244289 TGAGCAGAGGAGGAGAGGGTACGCTTAGCACGTTCGCAAGCAGTACGGAGACGGCGGAGA 244348 Query 7382 GCACGCGGGTTACCGGAA---ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG 7438 ||||| | ||| |||| | ||||||||| || || ||||| || || | ||| Sbjct 244349 GCACGGGCGTT---GGAAGTGAGATCTTTCTTGTGCTTGCGTTTGAATTCCTGGACAAAG 244405 Query 7439 T-GTCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCG 7496 | || || | || | | ||||| || |||||||||||||| || || || || |||| Sbjct 244406 TGGTTGACAAGACGGTTG--TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTCG 244463 Query 7497 CTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCAC 7556 | || || || || ||||| | ||||| | || | || ||||| || |||||||||| Sbjct 244464 CCTTCACCTCGAAAATACCCTCCTCAATAGTCAAAAGAGAGACATCGAAAGTACCACCAC 244523 Query 7557 CCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGA 7616 ||| ||||| || || ||||| || | | ||||| ||||||||||| |||| Sbjct 244524 CCAAATCAAAGATAAGAACGTTACGCTCTCCCTGGCCCTTCTTGTCGAGACCGTAAGCGA 244583 Query 7617 TAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCG 7676 | || || || || || || || || || || || ||| || |||||||| | | Sbjct 244584 TGGCAGCTGCAGTAGGCTCGTTGATGATGCGGAGGACGTTAAGACCAGCAATCAGACCAG 244643 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 || || || || || ||||| || ||||| || || || || || || | || || | Sbjct 244644 AGTCCTTGGTGGCCTGGCGTTGTGAGTCGTTGAAATATGCTGGAACGGTAATAACTGCAT 244703 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 |||| | ||| || ||||| || || | || |||| |||||||| ||||| | Sbjct 244704 TGTTGACGGTGCCACCAAGGTACGACTCGGCAGTCTCCCTCATCTTGGTAAGGACCATGG 244763 Query 7797 ATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 |||| || || || | | |||| || || || || || || ||||||| Sbjct 244764 ATGAGATTTCCTCCGGTGTAAACACCTTGGTCTCGCCCTTGAACTCAACTT 244814 >seq378 Length=483497 Score = 93.3 bits (102), Expect = 5e-14 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 7594 GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA-GAC 7652 || ||| || ||||| || || | ||| || || || ||||| || | || ||| | ||| Sbjct 6901 GTCCTTGTCAAGACCATAGGCCAGAGCGGCGGCAGTGGGTTCGTTGACAACACGCACGAC 6842 Query 7653 AGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712 | |||| |||||||| | | || || ||||| || || || || ||||||||||||| Sbjct 6841 A-TTCAAACCAGCAATTTGTCCAGCGTCCTTCGTAGCCTGACGCTGAGAATCGTTAAAGT 6783 Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGA 7742 |||| ||||| || ||||| |||| | ||| Sbjct 6782 AGGCGGGGACAGTGACGACAGCGTTCTTGA 6753 >seq363 Length=1528274 Score = 93.3 bits (102), Expect = 5e-14 Identities = 190/280 (68%), Gaps = 13/280 (5%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAG---GTCAAAAATGAGT--ACGTTCGTATCGTCGT 7589 |||||||| || ||||||||||| || || | ||||| | ||| || | |||| Sbjct 1261562 GAAACATCGAAAGTACCACCACCAAGATCGTAGACAATGATTTGACGCTC--ACCGTC-- 1261507 Query 7590 CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 ||||| || | || || ||||| || || || || || ||||||| |||||||| Sbjct 1261506 ----CTTCTTGTCCAATCCATAGGCGATGGCGGCGGCGGTGGGCTCATTAACAATACGAA 1261451 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 || || || || ||||| | ||||| || || ||||| || || | || || | Sbjct 1261450 GAACATTGAGACCGGCAATGACACCAGCATCCTTGGTAGCTTGACGCTGTGCGTCATTGA 1261391 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 ||||||| ||||| || || || |||| || || |||| | | || ||| || | Sbjct 1261390 AGTAGGCGGGGACAGTGACTACGGCGTGTGTAACCTTCTGGCTCAAGTAGCCTTCGGCAA 1261331 Query 7770 TATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | || ||||| ||| | |||||| | || ||||| || Sbjct 1261330 TCTCCTTCATCTTGCCCAAAACCATGGCGGAGATCTCCTC 1261291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129640214320