Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq391 118 1e-21 >seq391 Length=439218 Score = 118 bits (130), Expect = 1e-21 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 |||||||| | |||| | ||||| |||||| | || ||||| ||||| ||||||||| Sbjct 217888 GATATTGCCTTCGGTAATTCCCAAAGATTTGGTGTCCCAATGGGCTATGGTGGTCCTCAT 217829 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 || || ||||||||||| | || | ||| | ||||| ||||||||| || | || Sbjct 217828 GCAGCTTTCTTTGCAACTTCGGATAGCGGCAAGCGCAAGATGCCTGGCAGACTTATCGGC 217769 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 || ||| | ||| |||| || || ||| | | || ||||| || |||||| Sbjct 217768 GTTTCTAAGGATCGCCTTGGTGATAAGGCCTATAGACTTTCGCTCCAGACAAGGGAGCAG 217709 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 ||||| | | || || || || ||||| ||||| || ||||| || || |||| ||| Sbjct 217708 CATATTCGACGCGAGAAGGCCACTAGTAATATCTGTACTGCTCAAGCCCTATTGGCAAAT 217649 Query 153987 ATG 153989 ||| Sbjct 217648 ATG 217646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579209918416320