Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq320 174 3e-38 seq383 158 3e-33 seq98 100 6e-16 seq342 87.8 4e-12 >seq320 Length=806987 Score = 174 bits (192), Expect = 3e-38 Identities = 165/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| ||||||||||| ||||| || ||||||| |||||| | ||||| || Sbjct 609733 AACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTC 609792 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | ||||||||| || ||||| | || || |||||||||||||| || || || || || Sbjct 609793 CAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTG 609852 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || |||||| || || || ||||| ||| ||||| || ||||| | ||||| Sbjct 609853 AATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTT 609912 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| ||||||||||| ||||| | ||||||| Sbjct 609913 TCCGGTCAAAGTTTTAACGAAAATTTGCATT 609943 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| || ||||| |||||||| | || || | ||||| || Sbjct 609962 ACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCA 610021 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | |||||| |||||||||||||| || || || ||||| Sbjct 610022 AGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGG 610081 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||||||| |||||||||||||| || || || ||||| | ||||| Sbjct 610082 ATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTG 610141 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || || || || || | ||||||| Sbjct 610142 CCGGTTAAGGTCTTGACAAAGATTTGCATT 610171 Score = 141 bits (156), Expect = 2e-28 Identities = 143/186 (77%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| ||||| || ||||| ||||| || |||||||| | || || | || || || Sbjct 610472 AACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCCGTCCTC 610531 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || || ||||| | ||||| || ||||||||||| || || ||||| || Sbjct 610532 AAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTGTCCTG 610591 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||||||||| || || |||||||| |||||| |||||||||| || || Sbjct 610592 AATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATGGTTTT 610651 Query 195111 TCCTGT 195116 ||| || Sbjct 610652 TCCAGT 610657 Score = 123 bits (136), Expect = 6e-23 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| ||||||||||| ||||| || ||||||| ||| || | ||||| || Sbjct 610189 AACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGGGTACGACCATCCTC 610248 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || ||||| || | || || |||||||| || ||||| || || || || Sbjct 610249 AAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTG 610308 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || ||| |||||| || ||||| || || ||| ||||| || ||||| | ||||| Sbjct 610309 GATCTTTGACTTGACATTGTCAATAGTATCAGAAGACTCCACCTCGAGGGTGATTGTCTT 610368 Query 195111 TCCTGT 195116 || || Sbjct 610369 GCCAGT 610374 >seq383 Length=466833 Score = 158 bits (174), Expect = 3e-33 Identities = 147/187 (79%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || |||||||| ||||| ||||| |||| || ||||| |||||||| Sbjct 193473 ACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCC 193414 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||| || || || || || ||||| || |||||||||||||| || ||||||||| Sbjct 193413 AATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCTTGA 193354 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||| || || || ||||||||| || |||||||| || | |||||| Sbjct 193353 ATTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTGTCTTT 193294 Query 195112 CCTGTCA 195118 || |||| Sbjct 193293 CCGGTCA 193287 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| || |||||||| || ||||| || |||| ||||| | |||||||||| Sbjct 193181 ACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCCATCTTCG 193122 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| ||||| ||||| || | || || |||||||||||||| |||||||||||||| Sbjct 193121 AGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCTTTGTCTTGG 193062 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || ||||||||||| || || || | || | |||||| Sbjct 193061 ATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACCTCCAAAGTGATGGTCTTT 193002 Query 195112 CCTGT 195116 || || Sbjct 193001 CCGGT 192997 Score = 132 bits (146), Expect = 1e-25 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 |||||||| || || ||||| ||||| ||||| ||||| |||| || | || || || Sbjct 193701 ACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCACTCAAG-GTACGACCGTCCTC 193643 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||||| ||||||||||| || ||||||||||| || |||||||| || || || Sbjct 193642 TAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTG 193583 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| || || || |||||| || || || || |||| || || Sbjct 193582 AATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTT 193523 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | ||||| Sbjct 193522 ACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 >seq98 Length=1126903 Score = 100 bits (110), Expect = 6e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 194977 GTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATG 195036 ||||| ||||||||||| ||||| || || || || | | || || || ||||| || Sbjct 1023249 GTTCTTCCATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATC 1023308 Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096 || || || ||||| ||||| |||||| || ||||| || || || || || || || Sbjct 1023309 CCCTCCTTATCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCTCC 1023368 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | ||| | ||||| || |||||||| || ||||| | |||||| Sbjct 1023369 AAGGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATT 1023413 >seq342 Length=727325 Score = 87.8 bits (96), Expect = 4e-12 Identities = 199/294 (68%), Gaps = 9/294 (3%) Strand=Plus/Minus Query 160582 AGAGATTT--TCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAAT 160639 |||||||| ||||||| | |||| | ||||| |||||||||||||| | | ||| Sbjct 61011 AGAGATTTGTTCTACGCTCTTTGGATCCCTGATCTATTCATGAAGAGAGTTGAGGCAAAT 60952 Query 160640 GGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCC 160699 | || |||||||| || ||||| |||||||| || || | | || |||| ||| Sbjct 60951 GCCGAGTGGAGCCTCTTTTGTCCTAATGAAGCCCCAGGTTTGGCCGACGTTTGGGGTGAA 60892 Query 160700 GAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGA----GCCAAAAAGGTCGT 160755 || |||||| |||| ||| | | ||| | | || | |||| || ||| | | Sbjct 60891 GAATTCGAGGCTCTCTATAACAAATATG-AGAATACTAAAGACCTTGCTCGCAAGACCAT 60833 Query 160756 GAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTT 160815 || || ||| |||| ||| ||||||| || | |||||| ||| || | || || Sbjct 60832 CAAAGCGCAAAAACTCTGGTATCACATTCTCGAAGCCCAAACTGAGACTGGCAACCCTTT 60773 Query 160816 TATCGCATACAAGGATGCCATCT-GTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868 || |||||||| | ||| | ||||| |||||| ||||||| |||| Sbjct 60772 CATGCTCTACAAGGACG-CATGTAACCGCAAATCCAACCAGCAGAACTTGGGAA 60720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109475942337266