Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq320 105 4e-18 seq383 89.7 3e-13 >seq320 Length=806987 Score = 105 bits (116), Expect = 4e-18 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| ||||||||||||||||| || ||||| | || |||| || Sbjct 609733 AACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTC 609792 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| || || ||||| || | || ||||||||| | || | |||||||| || Sbjct 609793 CAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTG 609852 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||||| ||||| || | ||||| ||| | ||| || |||| ||| || | Sbjct 609853 AATCTTCGACTTGAC--AT--TGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAG 609908 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| || | ||| || || || || ||||| Sbjct 609909 TCTTTCCGGTCAAAGTTTTAACGAAAATTTGCAT 609942 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| || || || ||| | || |||| || ||||| ||||| || || Sbjct 609980 TCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAG 610039 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||||||||||||| | || | |||||||| || || ||| |||||| Sbjct 610040 ATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGGATTTTCGACTTGACGTTG 610099 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| ||| || || || || || | ||||| ||| Sbjct 610100 TCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGACA 610159 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 610160 AAGATTTGCAT 610170 Score = 86.0 bits (94), Expect = 4e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| ||||||||||||||||| || |||||| | || |||| || Sbjct 610189 AACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGGGTACGACCATCCTC 610248 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || ||||| || || | || ||||||||| | || | |||||||| || Sbjct 610249 AAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGGGGGATGCCCTCCTTATC 610305 >seq383 Length=466833 Score = 89.7 bits (98), Expect = 3e-13 Identities = 99/130 (76%), Gaps = 4/130 (3%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| ||||| || ||| ||| |||| |||| || || ||||||||| Sbjct 193455 TCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCCAATTGCTTGCCGGCAAAT 193396 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||| ||| | || | ||||||||||| ||| || |||||| || Sbjct 193395 ATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCTTGAATTTTGCCTTTGAC--AT 193338 Query 34911 GCTATCGATT 34920 |||||||| Sbjct 193337 --TATCGATT 193330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632025324144