Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq342 149 7e-31 >seq342 Length=727325 Score = 149 bits (164), Expect = 7e-31 Identities = 384/582 (66%), Gaps = 10/582 (2%) Strand=Plus/Plus Query 48258 CTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGC 48317 |||| ||||| |||||| |||| | | | |||| || || | |||||| || ||| Sbjct 61070 CTTACCTCTTCCTTGCCATGATTCTTCCTCAAGTCAATGAAATCGAATATATCCGCGTGC 61129 Query 48318 CATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATAT 48377 ||||| || | || || || | | || |||| || || ||||| || || | ||| Sbjct 61130 CATGGCTCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCCTGGTCAACATAC 61189 Query 48378 CTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTT 48437 ||||| |||| ||| | |||||||||||||| ||||| || || || |||||||||| Sbjct 61190 CTGGCGGTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAACTACCATTGGTC 61249 Query 48438 CCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCC 48497 || | |||||| ||| |||| | || ||| | || ||||| || || Sbjct 61250 CCGGCAATATAGGAACCAGTAGCACGAATGCAGTGAATGTTGAGTCCAATACCGCCAGCA 61309 Query 48498 ATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCT 48557 |||| || || | |||||| ||||||||||| ||||| || || || || || Sbjct 61310 GTTTTTGAAATCATAGCACAGGTCTTAAGGGTATCGTAAATACCATCAATCGAGTCCCCT 61369 Query 48558 ATCATATTTAATAGAAAACA--ACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATA 48615 ||||| | | | ||||| || ||| | | |||| || |||| ||| || | Sbjct 61370 TTCATAGTAACCAAGAAACAGGACGAGAGTTGAGGCGATG--GTGTGCCTGCATTGAAGA 61427 Query 48616 ATGTTGGAGATGCATGAATAAACCATTTCTCTGATAAC---AATTTATATGTTTCAATAA 48672 || || || ||||| ||| | | || ||| || | |||||||| || |||| Sbjct 61428 GAGTAGGCGAAGCATGGGTAA---AATACTTTGAAGACGTGAGGTTATATGTCTCGATAA 61484 Query 48673 CAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTC 48732 | || | |||| | ||| || || | || |||||||| | ||||| ||||| | Sbjct 61485 CCTTGTCGACATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATATGCTGAGGAC 61544 Query 48733 TTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAA 48792 ||| ||| ||| ||| || | ||| || || ||||| ||||| || |||| Sbjct 61545 GCTCAGCAACTTTTCCATTGATGCGAAGAAGGTACGAACGCTCCAAAGTTTTGAAGCCAA 61604 Query 48793 AATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAAT 48834 | || ||||| ||| || ||||| | ||||| | |||| Sbjct 61605 AGTAATTGTAGTTAAAATCCTTATCGTAGATAATGGCAGAAT 61646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562106003508720