Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq10 107 2e-17 seq363 102 7e-16 seq383 98.7 8e-15 seq320 91.5 1e-12 >seq10 Length=387623 Score = 107 bits (118), Expect = 2e-17 Identities = 140/192 (73%), Gaps = 9/192 (5%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| || || || ||||||||||| || ||||||||||| || || || || || Sbjct 244703 ATGCAGTTATTACCGTTCCAGCATATTTCAACGACTCACAACGCCAGGCCACCAAGGACT 244644 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| | |||||||| ||||| || || || || ||||| || |||||||| ||||| Sbjct 244643 CTGGTCTGATTGCTGGTCTTAACGTCCTCCGCATCATCAACGAGCCTACTGCAGCTGCCA 244584 Query 550518 TTGCATATGGACTTGATAAACATAATGATCA---AGAACTTAATGTACTCATCTTTGATT 550574 | || || || || || | | || | || ||| | ||| || || |||||||||| Sbjct 244583 TCGCTTACGGTCTCGACA---AGAAGGGCCAGGGAGAGCGTAACGTTCTTATCTTTGATT 244527 Query 550575 ---GTGGAGGTA 550583 |||| |||| Sbjct 244526 TGGGTGGTGGTA 244515 >seq363 Length=1528274 Score = 102 bits (112), Expect = 7e-16 Identities = 114/151 (75%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 550387 AGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAG 550445 ||||| |||| | || ||| | ||||| || || || || |||||| |||| ||||||| Sbjct 1261352 AGAAGGTTACACACGCCGTAGTCACTGTCCCCGCCTACTTCAATGACGCACAGCGTCAAG 1261411 Query 550446 CTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTA 550505 |||| || |||||||| ||||| || || ||||||||||||||| | ||||| || | Sbjct 1261412 CTACCAAGGATGCTGGTGTCATTGCCGGTCTCAATGTTCTTCGTATTGTTAATGAGCCCA 1261471 Query 550506 CTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | || || || | || |||||| | || || Sbjct 1261472 CCGCCGCCGCCATCGCCTATGGATTGGACAA 1261502 >seq383 Length=466833 Score = 98.7 bits (108), Expect = 8e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || ||||| || |||||| ||||| ||| ||||| || | || ||||| Sbjct 193482 AGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTG 193423 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||| || |||||||| || || | ||||||||| |||||||| || || Sbjct 193422 CCATCTTCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCC 193363 Query 563377 TTATCTTGAATTTT 563390 || ||||||||||| Sbjct 193362 TTGTCTTGAATTTT 193349 Score = 89.7 bits (98), Expect = 4e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || ||||||||||||||| ||||| ||||| || || | ||||| | Sbjct 193190 AGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGC 193131 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || ||||| ||||| ||||| | | ||||| || |||||||| |||||| Sbjct 193130 CCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCT 193071 Query 563377 TTATCTTGAATTTT 563390 || ||||| || || Sbjct 193070 TTGTCTTGGATCTT 193057 >seq320 Length=806987 Score = 91.5 bits (100), Expect = 1e-12 Identities = 103/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| |||||||||||||| ||| ||||| || |||||||| | || || | Sbjct 610464 AGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGG--ATGTTGTAATCTGAGAGGGTGC 610521 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 | || ||||| || ||||| ||||| || | | ||||||||| ||||||||||| | Sbjct 610522 GTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCT 610581 Query 563375 CTTTATCTTGAATTTT 563390 | || || ||||| || Sbjct 610582 CCTTGTCCTGAATCTT 610597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029274951965020