Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq344 98.7 8e-16 >seq344 Length=693110 Score = 98.7 bits (108), Expect = 8e-16 Identities = 436/688 (63%), Gaps = 28/688 (4%) Strand=Plus/Minus Query 29722 TTAAAGTCGTCCAGGTTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGC 29781 || ||||| || | | ||||| ||| || ||| | || || || || || || Sbjct 555129 TTGAAGTCATCAATATCATCCACTTGCCTATTGATCTTGAGAGTAGGGAACTCCCTAGGG 555070 Query 29782 TCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCC 29841 ||||||| | ||| ||||| || ||| | ||||| || || || || || ||| Sbjct 555069 GCCCTCTCCAACTGCCCCTTCAACGCATCCGCATGATCGGCATAAACATGCGCATCCCCC 555010 Query 29842 AGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGG 29901 | ||||| | |||||| || || || || || || || || ||||| ||||||| Sbjct 555009 ATAGTGTGTATAAACTCCCCAGGCTCCAGGCCACACACATGCGCAATCATTATCGTGAGG 554950 Query 29902 AGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAG 29961 || | ||| ||||| ||||| || || || |||||||| || | |||||| || Sbjct 554949 AGCGCGTACGAAGCGATATTAAACGGGACACCAAGCCCCATATCACAGCTCCTCTGATAC 554890 Query 29962 AGCTGACACGAGAGCTCTCCGT--------CGCTC----------ACGTAAAACTG---A 30000 | | ||| ||| | || | ||| || || || || | Sbjct 554889 AACACACAACTCAGCGCCCCCATACCTTTCCCCTCCTTGTACGAGACATAGAATTGGGCA 554830 Query 30001 CACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCAC 30060 ||||| || ||||| || | ||||| ||| || || ||||| |||| | Sbjct 554829 AACATG---TGACACGGCGGCAACGCCATCTTCGCCAGATCCGCCGGATTCCAAGCGCTC 554773 Query 30061 ACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGA 30120 | ||||||||| | ||| | ||||||||| ||| || | | ||| |||||| Sbjct 554772 ATGATGATGCGGCGGTCGTAGGGGTTGTTCTTGAGCTTGTATATGACGTCGGCGAGCTGA 554713 Query 30121 TCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTC 30180 ||||| ||| ||||||||||| | ||| ||||| ||| || || |||| | Sbjct 554712 TCCACGCCCTGGCCCGAGTAGTCCGTGTGGCAGTCGACGTACTTTGCGCCAAAGTGCCGC 554653 Query 30181 CACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC-TCGAAGCCC-CTCT 30238 ||||| || ||||| || || |||||||| ||||| | | | | || ||||| | Sbjct 554652 CACTGAAATCCGTAGACGGGGCCCAGGTCACCCTCCGCGCGCTCCGTC--AGCCCGATGC 554595 Query 30239 TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCT 30298 |||||| | | | || ||||| | ||||||||||| || ||| | |||||| Sbjct 554594 TGTCCAGGTAAGCGCGCGACCCGTTTCCCTCCCAGATCTTCACGCCCACGGCCGAGAGCG 554535 Query 30299 CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAA 30358 | | | || || || | |||||| || ||||| | | || ||| || | Sbjct 554534 GGGCGTTGCTGGTCGAGCCCGAAATGAACCAGAGGAGCTCGTGAAGGATGGCTTTGTGGA 554475 Query 30359 AGACCCTCTTGGTCGTGAGGAGGGGAAA 30386 ||| | ||| ||||| |||||||| || Sbjct 554474 AGAGGCGCTTTGTCGTCAGGAGGGGGAA 554447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615617949254