Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq383 147 2e-30 seq320 111 1e-19 seq98 89.7 4e-13 >seq383 Length=466833 Score = 147 bits (162), Expect = 2e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || |||||||| ||||| || || ||||| |||| || |||||| |||| ||||||||| Sbjct 193467 TGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCCAATTGC 193408 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || |||||||||| ||| || ||||| || |||||||| || || ||||||||||| Sbjct 193407 TTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCTTGAATTTTG 193348 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| | || | ||||| || | || ||||||||||||| || || ||||| Sbjct 193347 CCTTTGACATTATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTGTCTTTCCGGT 193289 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||||||||| ||||| || ||||| || |||| || ||| | |||| || | || Sbjct 193176 ATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCCATCTTCGAGCTG 193117 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||||| || || ||||||||||| || || || ||||| |||||||| ||||| || || Sbjct 193116 TTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCTTTGTCTTGGATCTT 193057 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||||| || | || || || | ||||| || || ||||| Sbjct 193056 GCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACCTCCAAAGTGATGGTCTTTCCGGT 192997 >seq320 Length=806987 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||||||||| || || || || |||||||| | || || | | |||| || | || Sbjct 609967 ATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCAAGCTG 610026 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || ||||| || || || || || ||||| || || |||||||| ||||| Sbjct 610027 CTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGGATTTT 610086 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| || | || || || || |||| || |||||||| Sbjct 610087 CGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCGGT 610146 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 ||| || || ||||| || ||||| Sbjct 610147 TAAGGTCTTGACAAAGATTTGCAT 610170 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | |||||||||||| || ||||| || |||||||| | || || | | Sbjct 610466 ACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCC 610525 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | ||||| || ||||| |||||||| || ||||| || ||||| || || || Sbjct 610526 GTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTT 610585 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||| || || || | || | |||||| |||| |||||| ||||| || | Sbjct 610586 GTCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAAT 610645 Query 101434 CGTTTTGCCGGT 101445 ||||| || || Sbjct 610646 GGTTTTTCCAGT 610657 >seq98 Length=1126903 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 101306 GTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATG 101365 ||||| |||| || | |||||| || ||||||||||| | ||| ||||| || || || Sbjct 1023249 GTTCTTCCATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATC 1023308 Query 101366 CCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCA 101425 || || |||||||| ||||| || ||| | || | || || || | || || || Sbjct 1023309 CCCTCCTTATCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCTCC 1023368 Query 101426 AGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | |||| || || ||||| ||||| || || || |||||||| Sbjct 1023369 AAGGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCAT 1023412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276477802086