Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq320 122 7e-23 seq383 89.7 4e-13 >seq320 Length=806987 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||||| || || ||| |||||| ||||| || ||||| || Sbjct 609716 CCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAA 609775 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | ||| | || |||||||||||||| ||||| |||| ||||| || || | ||| Sbjct 609776 AGAGTACGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGA 609835 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||| || |||||| || ||| | | | || || | ||||||| Sbjct 609836 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACC 609895 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || ||||| ||||||||||| || ||||| ||||| Sbjct 609896 TCGAGGGTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCAT 609942 >seq383 Length=466833 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| ||||| ||||| |||||| | | ||| |||| || | |||||||||||| || Sbjct 193684 CTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAA 193625 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || |||||||| || | ||| | ||| ||||| || |||||| || || Sbjct 193624 GATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGAATCTTACCCTTCACGTT 193565 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | ||| ||||| | ||||| ||||| || || | ||||| || Sbjct 193564 GTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGAC 193505 Query 48755 AAAAATCTGCAT 48766 |||||||||||| Sbjct 193504 AAAAATCTGCAT 193493 Score = 86.0 bits (94), Expect = 5e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| ||||| ||||| || || || ||| | || ||||| ||||| |||||||| Sbjct 193456 CTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCCAATTGCTTGCCGGCAAA 193397 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||||| || || ||||| | |||| |||||||||||| ||| || ||| ||| Sbjct 193396 TATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCTTGAATTTTGCCTTTGACATT 193337 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCA 48744 | | | | || || | ||| || || | || || || ||||| |||| Sbjct 193336 ATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTGTCTTTCCGGTCA 193287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935752214554