Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq320 109 4e-18 seq383 104 2e-16 seq378 93.3 3e-13 seq10 93.3 3e-13 >seq320 Length=806987 Score = 109 bits (120), Expect = 4e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| ||||||||||| ||| || || | || ||||| | || || Sbjct 610460 ACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGT 610519 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || ||||| |||||||||||||| || | |||||| ||||| ||||||||||| Sbjct 610520 GCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCC 610579 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| |||||||| ||||| || ||||| || | | ||||| Sbjct 610580 CTCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAG 610639 Query 480731 GGTAATAGTTTTACCGGTGA 480750 |||||| ||||| || |||| Sbjct 610640 GGTAATGGTTTTTCCAGTGA 610659 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || | ||||| || ||||| || |||||||| | ||||| Sbjct 609721 ACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGT 609780 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || | ||||| |||||||| || | || || || || |||||||| || Sbjct 609781 ACGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACC 609840 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAA 480729 ||||| || |||||||| |||||| || || || |||| | | | | | | Sbjct 609841 CTCCTTATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCT-CGA 609899 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| ||||| || ||||| | ||| |||||||||||||| Sbjct 609900 GGGTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTG 609939 >seq383 Length=466833 Score = 104 bits (114), Expect = 2e-16 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || ||||| || || ||| ||||| || || || || | || ||| Sbjct 193485 CGCAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTT 193426 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| | |||||| || ||||| || |||||||| ||||| |||||||| || Sbjct 193425 CTGCCATCTTCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCC 193366 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACA 480698 |||||||||||||| || ||||||| Sbjct 193365 TCCTTGTCTTGAATTTTGCCTTTGACA 193339 Score = 87.8 bits (96), Expect = 1e-11 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || ||||||||||| ||| ||||| | |||||| || | ||||| Sbjct 193194 ACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGT 193135 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| || || || || || ||||| | ||| || || || |||||||| || Sbjct 193134 GCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCC 193075 Query 480671 TTCCTTGTCTTGAATCTT 480688 ||| |||||||| ||||| Sbjct 193074 TTCTTTGTCTTGGATCTT 193057 >seq378 Length=483497 Score = 93.3 bits (102), Expect = 3e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||| || || || ||||| |||||||| ||||| || || || || || ||| |||| Sbjct 6770 ACTGTCCCCGCCTACTTTAACGATTCTCAGCGTCAGGCTACGAAGGACGCTGGACAAATT 6829 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | ||| || | || ||||| || || ||||| || || |||||| Sbjct 6830 GCTGGTTTGAATGTCGTGCGTGTTGTCAACGAACCCACTGCCGCCGCTCTGGCCTATGGT 6889 Query 474866 CTTGATAAG 474874 ||||| ||| Sbjct 6890 CTTGACAAG 6898 >seq10 Length=387623 Score = 93.3 bits (102), Expect = 3e-13 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTC 474711 ||| ||||||| |||| || || ||||| | |||| |||| | || || ||| || Sbjct 244785 TTTACACCGGAGGAAATCTCATCCATGGTCCTTACCAAGATGAGGGAGACTGCCGAG-TC 244727 Query 474712 ATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTC 474771 || ||||| || | ||||||| ||||| |||||||||||||| || || || Sbjct 244726 GTACCTTGGTGGCACCGTCAACAATGCAGTTATTACCGTTCCAGCATATTTCAACGACTC 244667 Query 474772 TCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTAT 474831 ||||| || || || || || | || ||||| |||||||| || | || || || Sbjct 244666 ACAACGCCAGGCCACCAAGGACTCTGGTCTGATTGCTGGTCTTAACGTCCTCCGCATCAT 244607 Query 474832 TAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || || || || ||||| || | ||||| ||||| || ||||| Sbjct 244606 CAACGAGCCTACTGCAGCTGCCATCGCTTACGGTCTCGACAAGAA 244562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268162127848904