Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq383 109 8e-19 >seq383 Length=466833 Score = 109 bits (120), Expect = 8e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | ||||||||||| ||||| || ||||||||| ||| Sbjct 193721 ATGCAGATTTTTGTCAAAACCCTTACTGGAAAAACCATTACTTTGGAAGTCGAATCTTCC 193780 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||| || |||||| || ||||| || || || || ||||| ||| Sbjct 193781 GATACTATTGACAACGTCAAGGGTAAAATCCAGGATAAGGAGGGTATCCCCCCAGATCAA 193840 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | || | ||| ||||||||| | || ||| | ||||| || |||| Sbjct 193841 CAACGTCTTATCTTTGCTGGTAAGCAGTTGGAGGATGGACGTACTTTGAGCGACTATA-- 193898 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGT 156031 ||||||||| ||| | || || || || || Sbjct 193899 ATATCCAAAAGGAGTCAACTCTACACTTGGT 193929 Score = 89.7 bits (98), Expect = 8e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 155895 AACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATT 155954 || ||||| | || || ||||| |||||||| || |||||||| || || | |||||| Sbjct 193045 AATGTGAAGAGCAAGATCCAAGACAAAGAAGGGATTCCTCCAGACCAGCAGCGTTTGATT 193104 Query 155955 TATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAG 156014 | |||||||| |||||||||||| | ||| | || || |||||||| |||||| Sbjct 193105 TTCGCCGGTAAACAGCTCGAAGATGGGCGCACTCTCTCCGACTATAATATCCAGAAAGAG 193164 Query 156015 GCGACGCTTCAT 156026 | || |||||| Sbjct 193165 TCTACCCTTCAT 193176 Score = 89.7 bits (98), Expect = 8e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | || || ||||||||||| | || ||||| ||| Sbjct 193493 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCG 193552 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || |||||||| ||| || || ||||| |||||||| || ||||| ||| Sbjct 193553 GATACGATCGACAACGTGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 193612 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | || | |||||||||||||| || || | || || ||||||| Sbjct 193613 CAGCGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTACCTTGAGTGATTATA-- 193670 Query 156003 ATATCCAAA--GAGGCGACGCTTCA 156025 ||||||||| ||| |||| || || Sbjct 193671 ATATCCAAAAGGAGTCGACCCTCCA 193695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731868358936800