Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq383 122 2e-22 seq320 91.5 3e-13 >seq383 Length=466833 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || || |||| ||| | ||| || |||||||| || Sbjct 193950 ATACCACCACGAAGACGGAGAACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCG 193891 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| ||| | || ||||| || ||||||||||| || | | ||||| || || Sbjct 193890 CTCAAAGTACGTCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGG 193831 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || ||||| || |||||| || || || |||||||| || ||||| Sbjct 193830 GGGATACCCTCCTTATCCTGGATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATTCG 193771 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||||||||| ||||| | ||||| | || |||||||| Sbjct 193770 ACTTCCAAAGTAATGGTTTTTCCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||||| || || | || | || | || | ||| || ||||||||||| Sbjct 193722 ATACCACCTCGCAGACGAAGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCA 193663 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || |||| || | || ||||| || || || | | ||||||||| || Sbjct 193662 CTCAAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGG 193603 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| ||||| || || ||| || || || || ||||| || || || Sbjct 193602 GGGATGCCTTCCTTATCCTGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCG 193543 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || |||||||| |||||||| || | ||||| | || |||||||| Sbjct 193542 ACCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 >seq320 Length=806987 Score = 91.5 bits (100), Expect = 3e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 171878 CTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAA 171937 |||||| ||| |||||||| || | || || | || ||||| || ||||||||||| Sbjct 609751 CTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTCCAACTGCTTACCAGCAAA 609810 Query 171938 AATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 171997 || || | ||| ||||| || || || || || ||||| || || || || ||||| Sbjct 609811 GATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGACTTGACATT 609870 Query 171998 AGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 172057 || || || || || || || || || || || || || || || || ||||||| Sbjct 609871 GTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTTCCGGTCAAAGTTTTAAC 609930 Query 172058 GAATATCTGCATT 172070 ||| || |||||| Sbjct 609931 GAAAATTTGCATT 609943 Score = 84.2 bits (92), Expect = 4e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | ||| || | || | ||| | |||| ||| || || || |||||| Sbjct 610452 ATACCGCCACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCT 610511 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| |||| || | || || |||||||| || || | || || || || Sbjct 610512 GAGAGGGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGA 610571 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| || || || || || ||| || || || ||||| || |||||||| Sbjct 610572 GGAATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCC 610631 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGT 172045 || || || ||||||||||| ||||| Sbjct 610632 ACCTCAAGGGTAATGGTTTTTCCAGT 610657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905131496948400