Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq342 167 7e-36 seq22 100 8e-16 seq109 91.5 4e-13 >seq342 Length=727325 Score = 167 bits (184), Expect = 7e-36 Identities = 359/536 (67%), Gaps = 3/536 (1%) Strand=Plus/Plus Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 ||| || | ||| |||||||||| | || | ||| || ||||| | || ||| Sbjct 61075 CTCTTCCTTGCCATGATTCTTCCTCAAGTCAATGAAATCGAATATATCCGCGTGCCATGG 61134 Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085 ||||| || |||||||| || |||||| || ||||| || ||||||| || Sbjct 61135 CTCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCCTGGTCAACATACCTGGC 61194 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 || | ||| || || | || ||| || | ||| || || ||| | |||||||| ||| Sbjct 61195 GGTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAACTACCATTGGTCCCGGC 61254 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||||| ||||||| | |||| ||||| | ||||||||||| || | ||| Sbjct 61255 AATATAGGAACCAGTAGCACGAATGCAGTGAATGTTGAGTCCAATACCGCCAGCAGTTTT 61314 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 ||||| ||| || ||| | |||| | ||||||| ||||| || || ||| ||| Sbjct 61315 TGAAATCATAGCACAGGTCTTAAGGGTATCGTAAATACCATCAATCGAGTCCCCTTTCAT 61374 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | | | | || || | |||||| |||||| || || ||||| || ||||| Sbjct 61375 AGTAACCAAGAAACAGGACGAGAGTTGAGGCGATGGTGTGCCTGCATTGAAGAGAGTAGG 61434 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 | ||||| |||||||||| |||| | | |||||||| ||| ||| || | Sbjct 61435 CGAAGCATGGGTAAAATACTTTGAAGACGTGAGGTTATATGTCTCGATAACCTTGTCGAC 61494 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 || || ||||| | || || || | ||| |||||||||||||||||| ||| Sbjct 61495 ATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATATGCTGAGGACGCTCAGCAAC 61554 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501 ||||| || || |||||||| | || |||| |||||| || || || |||| Sbjct 61555 TTTTCCATTGATGCGAAGAAGGTACGAACGCTCCAAAGTTTTGAAGCCAAAGTAAT 61610 >seq22 Length=360227 Score = 100 bits (110), Expect = 8e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | ||||||||||| || ||||| || |||||||||||||||||||| | | Sbjct 182189 GCACCGTGAGCGATCATACAATCGCGTTCCATCTCCCCGAAACGAAGACCACCATCTCTA 182130 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | |||||| |||| || ||||||||| | | ||| || ||| || ||| Sbjct 182129 GCACGACCCTCAACAGGTTGGCGAGTGAGAATCTGGACAGGTCCTCTGGCCCGAGCATGA 182070 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 ||| || | |||||||| |||| || ||||| | | ||| || | ||| Sbjct 182069 ATCTTGTCGTCAACCATATGTCTGAGGCGTTGGTAATAGGTGGGTCCTAGGAA 182017 >seq109 Length=2233489 Score = 91.5 bits (100), Expect = 4e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 || || | |||||||||||| |||| ||| || | |||||| | ||| | | || | Sbjct 2001585 TTTCCGATAGCATCAATTTCATCAACGAAGATGATACACGGCGCATTCTTCCGGGCTTTG 2001644 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 ||||| | |||| ||||||||| | || | ||| || ||||||| |||||||||||| Sbjct 2001645 GCAAAGAGATCTCGTACACGGGAGGGGCCGACACCGACGAACATTTCCACAAATTCAGAA 2001704 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 || ||| | ||| | || | ||||| || || ||| |||| || ||||| Sbjct 2001705 CCGCTCACTGAGAAGAAAGGGACCTGGGCTTCCCCGGCAGTAGCCTTCGCAAGGAGTGTT 2001764 Query 289207 TTACCTGTTCCAGGTGGTCC 289226 ||||| || || || || || Sbjct 2001765 TTACCAGTACCGGGAGGCCC 2001784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810094650126