Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq383 111 1e-19 seq320 107 2e-18 >seq383 Length=466833 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || ||||| ||||| | ||||| ||| | || Sbjct 193721 ATGCAGATTTTTGTCAAAACCCTTACTGGAAAAACCATTACTTTGGAAGTCGAATCTTCC 193780 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || || ||||| || || || || || || || |||||| Sbjct 193781 GATACTATTGACAACGTCAAGGGTAAAATCCAGGATAAGGAGGGTATCCCCCCAGATCAA 193840 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| || || ||| |||||||| | | || || ||||| Sbjct 193841 CAACGTCTTATCTTTGCTGGTAAGCAGTTGGAGGATGGACGTACTTTGAGCGACTATAAT 193900 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || |||||||| || || ||||||||||| Sbjct 193901 ATCCAAAAGGAGTCAACTCTACACTTGGT 193929 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || ||||||||||||||||| ||||| || || | | Sbjct 193493 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCG 193552 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || || || ||||| || || || || ||| Sbjct 193553 GATACGATCGACAACGTGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 193612 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| ||||| | | | || |||||||| Sbjct 193613 CAGCGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTACCTTGAGTGATTATAAT 193672 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || ||| | || | || |||| || || Sbjct 193673 ATCCAAAAGGAGTCGACCCTCCACCTTGTCCTTCGTCTGCGAGGTGG 193719 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||||||||| || ||||| || || || |||||||| || ||||| ||| Sbjct 193057 AAGATCCAAGACAAAGAAGGGATTCCTCCAGACCAGCAGCGTTTGATTTTCGCCGGTAAA 193116 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||| | | | | || || ||||| || || || || || || || || Sbjct 193117 CAGCTCGAAGATGGGCGCACTCTCTCCGACTATAATATCCAGAAAGAGTCTACCCTTCAT 193176 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 | || |||| |||| || || Sbjct 193177 CTTGTCCTGCGTCTGCGTGGCGG 193199 >seq320 Length=806987 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| | ||||| || ||||| || ||||| || || | | Sbjct 609942 ATGCAAATTTTCGTTAAAACTTTGACCGGAAAGACTATCACCCTCGAGGTGGAGTCTTCT 609883 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || || || || || || ||||| || || Sbjct 609882 GACACAATCGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAG 609823 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||| |||||||| | | | || ||||||||| Sbjct 609822 CAGCGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGTACTCTTTCCGATTATAAC 609763 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || || || || || |||||||| Sbjct 609762 ATTCAGAAAGAGTCCACCCTTCACTTGGT 609734 Score = 107 bits (118), Expect = 2e-18 Identities = 135/184 (73%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || || ||||| ||||| || || || ||| | | ||||| | || | || || Sbjct 610657 ACTGGAAAAACCATTACCCTTGAGGTGGAATCGTCGGACACTATCGACAACGTCAAGTCT 610598 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| || ||||| ||||| ||||| ||||||||||||||||| || || Sbjct 610597 AAGATTCAGGACAAGGAGGGAATTCCTCCAGATCAGCAACGTTTGATCTTTGCTGGAAAG 610538 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA- 24906 ||||| ||||| | | | | |||||||| ||||| |||||||| || || || || Sbjct 610537 CAGCTTGAGGACGGACGCACCCTCTCAGATTACAACATCCAAAAGGAGTCTACCCTTCAT 610478 Query 24907 CTTG 24910 |||| Sbjct 610477 CTTG 610474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895361759440