Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03]
398 sequences; 124,945,702 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq383 111 1e-19
seq320 107 2e-18
>seq383
Length=466833
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || || || ||||| ||||| | ||||| ||| | ||
Sbjct 193721 ATGCAGATTTTTGTCAAAACCCTTACTGGAAAAACCATTACTTTGGAAGTCGAATCTTCC 193780
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || || ||||| || || || || || || || ||||||
Sbjct 193781 GATACTATTGACAACGTCAAGGGTAAAATCCAGGATAAGGAGGGTATCCCCCCAGATCAA 193840
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | |||||||| || || ||| |||||||| | | || || |||||
Sbjct 193841 CAACGTCTTATCTTTGCTGGTAAGCAGTTGGAGGATGGACGTACTTTGAGCGACTATAAT 193900
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| |||||||| || || |||||||||||
Sbjct 193901 ATCCAAAAGGAGTCAACTCTACACTTGGT 193929
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || ||||||||||||||||| ||||| || || | |
Sbjct 193493 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCG 193552
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || || || ||||| || || || || |||
Sbjct 193553 GATACGATCGACAACGTGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 193612
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| ||||| || ||||| ||||| | | | || ||||||||
Sbjct 193613 CAGCGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTACCTTGAGTGATTATAAT 193672
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| ||||| || ||| | || | || |||| || ||
Sbjct 193673 ATCCAAAAGGAGTCGACCCTCCACCTTGTCCTTCGTCTGCGAGGTGG 193719
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||||||||||||||| || ||||| || || || |||||||| || ||||| |||
Sbjct 193057 AAGATCCAAGACAAAGAAGGGATTCCTCCAGACCAGCAGCGTTTGATTTTCGCCGGTAAA 193116
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| || ||| | | | | || || ||||| || || || || || || || ||
Sbjct 193117 CAGCTCGAAGATGGGCGCACTCTCTCCGACTATAATATCCAGAAAGAGTCTACCCTTCAT 193176
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
| || |||| |||| || ||
Sbjct 193177 CTTGTCCTGCGTCTGCGTGGCGG 193199
>seq320
Length=806987
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| | ||||| || ||||| || ||||| || || | |
Sbjct 609942 ATGCAAATTTTCGTTAAAACTTTGACCGGAAAGACTATCACCCTCGAGGTGGAGTCTTCT 609883
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || ||||| || || || || || || ||||| || ||
Sbjct 609882 GACACAATCGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAG 609823
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||| || || ||| |||||||| | | | || |||||||||
Sbjct 609822 CAGCGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGTACTCTTTCCGATTATAAC 609763
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| || || || || || ||||||||
Sbjct 609762 ATTCAGAAAGAGTCCACCCTTCACTTGGT 609734
Score = 107 bits (118), Expect = 2e-18
Identities = 135/184 (73%), Gaps = 1/184 (1%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| || ||||| ||||| || || || ||| | | ||||| | || | || ||
Sbjct 610657 ACTGGAAAAACCATTACCCTTGAGGTGGAATCGTCGGACACTATCGACAACGTCAAGTCT 610598
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| || ||||| || ||||| ||||| ||||| ||||||||||||||||| || ||
Sbjct 610597 AAGATTCAGGACAAGGAGGGAATTCCTCCAGATCAGCAACGTTTGATCTTTGCTGGAAAG 610538
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA- 24906
||||| ||||| | | | | |||||||| ||||| |||||||| || || || ||
Sbjct 610537 CAGCTTGAGGACGGACGCACCCTCTCAGATTACAACATCCAAAAGGAGTCTACCCTTCAT 610478
Query 24907 CTTG 24910
||||
Sbjct 610477 CTTG 610474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895361759440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |