Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq287 111 2e-18 seq10 95.1 2e-13 seq394 91.5 2e-12 >seq287 Length=845177 Score = 111 bits (122), Expect = 2e-18 Identities = 209/303 (69%), Gaps = 12/303 (4%) Strand=Plus/Minus Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164 || || ||||| |||||||| || || ||||||||||| | ||||| || || ||||| Sbjct 538349 GAAGCAGTGCTAGAACTCAACGCTTCGGACGAGCGCGGGATCGACGTGGTCCG--GAATC 538292 Query 2019165 --ATCAAGCA--TCACGCTTCGAAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTG 2019218 |||||| || ||| | ||||| || || || ||||| | || ||||| Sbjct 538291 GCATCAAGGGATTCGCGC----AGAAGAAGGTCACGCTCCCACCCGGAAGACAGAAGGTT 538236 Query 2019219 ATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACC 2019278 | || |||||||| |||||| || | ||| ||| |||||||||||||||||| || Sbjct 538235 GTGATTCTCGATGAAGCCGACAGCATGACGGCGGGGGCCCAGCAGGCCCTCCGCCGCACG 538176 Query 2019279 ATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTC 2019338 ||||||| ||| | ||| || || || ||| | ||||||||| | | || Sbjct 538175 ATGGAAATATACTCATCCACCACCCGCTTCGCGTTTGCCTGCAACCAGAGCAACAAAATC 538116 Query 2019339 ATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398 ||||| | | || ||| ||||||||| | || | | |||||||| || || ||| Sbjct 538115 ATCGAGCCGTTGCAATCCCGCTGCGCCATCCTCCGTTACTCCCGCCTCACAGATGCGCAG 538056 Query 2019399 ATC 2019401 || Sbjct 538055 GTC 538053 >seq10 Length=387623 Score = 95.1 bits (104), Expect = 2e-13 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || ||||||||| |||| || || ||| | | Sbjct 178903 GTACTTGGTGACGGCCTTGGTGCCCTCAGAAACGGCGTGCTTGGCAAGCTCACCGGGGAG 178844 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||||| ||| || | |||||||||||||| Sbjct 178843 GATCAAGCGGACAGAAGTCTGGATCTCGCG 178814 >seq394 Length=416550 Score = 91.5 bits (100), Expect = 2e-12 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 2411512 AAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCG 2411571 || ||||| | ||| || ||||||||||| ||||||||| | | ||||| ||||||| Sbjct 360438 AATATCTTTCTCTGATCCACGCCGCCAAACTGCGCGTCGACGCCCAAGTGCTCCTCGTCG 360497 Query 2411572 AGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGG-TTGCGGTCCATCTTGAC 2411630 || ||||||||||||||||| | ||| ||| ||| ||| |||| || |||||| Sbjct 360498 AGCGCCTGCATGAGCGGGTAAATCAGGCCGCTTAGCAAAGGGCTTGC-AACCTGCTTGAC 360556 Query 2411631 CACCTGGGCGGCGGCCT--TTTGCGCCGTGCCGACGGTCACGCGCGCCGTCAGGCGCAAG 2411688 ||| | || | |||| || ||| ||||| |||| ||| | | ||||| || Sbjct 360557 CACTTCCGCACCCGCCTTCTTCGCGTCGTGC--TCGGTAACGATAGAGCTGAGGCGGAAC 360614 Query 2411689 AGGTCGAGCGTGTAGGCGGCGCCATGCTGGTA 2411720 | ||| | ||| ||||| || | |||||| Sbjct 360615 AAGTCCATAACGTACGCGGCCCCCTTCTGGTA 360646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916204062924722