Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq320 134 9e-27 seq383 105 4e-18 seq287 98.7 6e-16 seq349 84.2 1e-11 >seq320 Length=806987 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||| ||||||||||||||| || || || ||| | || |||| Sbjct 609959 AGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCC 610018 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||||| ||||||||||||| | || | |||||||| || Sbjct 610019 TCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCT 610078 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| |||||| | || | || || |||||| || | ||| || ||| Sbjct 610079 TGGATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTC 610138 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| |||||||| ||||| Sbjct 610139 TTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 610170 Score = 98.7 bits (108), Expect = 6e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||| |||||||||||||| || || ||| | || |||| Sbjct 610187 AGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGGGTACGACCATCC 610246 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| |||||||| |||| || ||||||||| | || | |||||||| || Sbjct 610247 TCAAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGGGGGATGCCCTCCTTATCC 610306 Query 34886 TTTATTTTTTGTTTGAC 34902 | || ||| ||||| Sbjct 610307 TGGATCTTTGACTTGAC 610323 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||| |||||||||||||| || || || | || |||| Sbjct 609731 AGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCC 609790 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || ||||||| || ||||||||| | || | |||||||| || Sbjct 609791 TCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCC 609850 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| | ||| || || | ||| || Sbjct 609851 TGAATCTTCGACTTGAC--AT--TGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGAT 609906 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || | || || || || || ||||| Sbjct 609907 AGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCAT 609942 Score = 82.4 bits (90), Expect = 5e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| |||||| || ||||| || || || ||| |||| | || Sbjct 610470 AGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCCGTCC 610529 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| || ||||||| |||||||| ||| | || | ||||||||||| Sbjct 610530 TCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTGTCC 610589 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | || || |||| ||| ||||| Sbjct 610590 TGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATGGTT 610649 Query 34946 TTTCCCGTGA 34955 ||||| |||| Sbjct 610650 TTTCCAGTGA 610659 >seq383 Length=466833 Score = 105 bits (116), Expect = 4e-18 Identities = 140/192 (73%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||| ||||||||||| ||||| || ||| | | |||| Sbjct 193476 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCT 193417 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| ||||| || ||||| |||||||| ||| | || | ||||||||||| Sbjct 193416 TCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCT 193357 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | ||||| |||||| || ||||||| || | |||||| |||| || || Sbjct 193356 TGAATTTTGCCTTTGAC--AT--TATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGAT 193301 Query 34942 GGTCTTTCCCGT 34953 |||||||| || Sbjct 193300 TGTCTTTCCGGT 193289 >seq287 Length=845177 Score = 98.7 bits (108), Expect = 6e-16 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||||||||||||||| ||||| |||||||| ||| |||| | || Sbjct 368624 AGGACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCC 368683 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || || || ||| | || | || ||||| || Sbjct 368684 TCAAGCTGCTTCCCAGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTATCC 368743 Query 34886 TTTATTT 34892 | ||||| Sbjct 368744 TCTATTT 368750 >seq349 Length=649591 Score = 84.2 bits (92), Expect = 1e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 || || ||||| |||||||| ||| | | |||| || || |||||||||||||||||| Sbjct 305985 TTTTGGATGTTGTAGTCCGAAAGGGTCCTTCCATCCTCTAGCTGCTTTCCGGCGAAGATC 306044 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTAT 34890 | || ||||||||| | || | ||||||||||| | ||| Sbjct 306045 AAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTCTAT 306085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691220186362