Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq10 187 2e-41 seq353 91.5 1e-12 seq378 86.0 5e-11 >seq10 Length=387623 Score = 187 bits (206), Expect = 2e-41 Identities = 683/1053 (65%), Gaps = 20/1053 (2%) Strand=Plus/Plus Query 281435 TTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA 281494 |||||| |||| |||||||| | || || ||||| || |||||||| || || | || Sbjct 243666 TTAAGA-TACCGTTGGCATCAATGTCGAAGGTGACCTCGATTTGAGGCACACCACGGGGA 243724 Query 281495 GCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTT 281554 || || ||||| || | | ||| |||| || ||||| || |||||| Sbjct 243725 GCGGGGGGGATTCCAGTAAGCTCGAATTTTCCAAGCAAGTTATTGTCCTTAGTGCGAGCG 243784 Query 281555 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 281614 || ||||||||||| | ||||| || | | || || || || |||| | || Sbjct 243785 CGCTCACCCTCGAATACCTGGATCAACACGCCGGGCTGGTTGTCGGAGAAAGTCGAGAAA 243844 Query 281615 ACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 281673 || || | | || || || | || || || | | || | | ||||| | ||| Sbjct 243845 AC-CTCGCTCTTCTTGGTCGGGACAGTGGTATTGCGCTTGATCAAAGGAGTCATGACACC 243903 Query 281674 ACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT--TGA 281731 |||||| || || | ||| || ||||| || | || || | | |||| || | || Sbjct 243904 ACCAGCGGTCTCGATACCGAGGGAAAGTGGGGCAACGTCGAGCA--ACAAGATCTCCTGG 243961 Query 281732 AGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 || || | || | | |||| ||||||||| || || | |||||||| || || || Sbjct 243962 -GTCTTAGAAGAGGTATCACCAGAAAGAATAGCCGCCTGGACGGCAGCACCGTAGGCGAC 244020 Query 281791 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG 281850 |||||| || ||||| | | | ||| | | || ||||||||||| | || | || Sbjct 244021 AGCTTCGTCGGGATTGATGGACTTATTGGGCTCCTTCCCATTGAAAAAGTCGGACACCAG 244080 Query 281851 TTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 281909 | ||| ||||| || ||||| | || || ||||| || ||||| || || || Sbjct 244081 CT-TCTGGACCTTGGGGATACGGGTAGAACCACCAACCAAGACAATCTCGTGGACGGAAC 244139 Query 281910 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACA 281969 ||||| | || || || | || || ||||| || | | | | || | Sbjct 244140 TCTTATCGATCTTAGAGTCACGAAGGACACGCTCGACGGGCTCCATAGTGGAGCGGAAGA 244199 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 282029 || || | |||||||| ||| | ||| | | | | ||||||| || | Sbjct 244200 GATCCTGGCACAACTCTTCGAAACGAGCACGAGTGATCGAGGTGTAGAAATCAATACCCT 244259 Query 282030 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 282089 | | | |||||||| ||| || | ||||||| || || || || | ||| ||||||| Sbjct 244260 CATAGAGAGAATCAATTTCGATGGAGGTTTGAGCAGAGGAGGAGAGGGTACGCTTAGCAC 244319 Query 282090 GTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT-TCAAATCTGTTTTA 282148 |||| || || || | || | || | || || | | || | | |||| | || Sbjct 244320 GTTCGCAAGCAGTACGGAGACGGCGGAGAGCACGGGC-GTTGGAAGTGAGATCTTTCTTG 244378 Query 282149 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCT 282208 | || | ||||| || | ||| | | |||||||| || || || || ||||| Sbjct 244379 TGCTTGCGTTTGAATTCCTGGACAAAGTGGTTGACAAGACGGTTGTCGAAGTCCTCACCA 244438 Query 282209 CCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAA 282268 ||||| | ||| | || | || || | || | ||||| || || |||| || |||| Sbjct 244439 CCCAAGTGAGTGTCACCGGCAGTCGCCTTCACCTCGAAAATACCCTCCTCAATAGTCAAA 244498 Query 282269 AGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT 282328 |||| ||||| || |||||||||| |||||| ||||| || || ||| | Sbjct 244499 AGAGAGACATCGAAAGTACCACCACCCAAATCAAAGATAAGAACGTTACGCTCTC---CC 244555 Query 282329 TGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 282385 ||| || || || ||||| || || | ||||| ||||| || || || || || | Sbjct 244556 TGGCCCTTCTTGTCGAGACCGTAAGCGATGGCAGCTGCAGTAGGCTCGTTGATGATGCGG 244615 Query 282386 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 282445 | || |||||||||||||| || | || || ||||| || | |||||| ||||| Sbjct 244616 AGGACGTTAAGACCAGCAATCAGACCAGAGTCCTTGGTGGCCTGGCGTTGTGAGTCGTTG 244675 Query 282446 AAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 |||||||| ||||| |||||||| |||| |||| Sbjct 244676 AAATATGCTGGAACGGTAATAACTGCAT-TGTT 244707 >seq353 Length=638970 Score = 91.5 bits (100), Expect = 1e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 || |||||||||||| || | || ||||||||||| |||||||||||| | || |||||| Sbjct 159418 GGAAAAGAAGGTCGTCTTCGTGGTAATTTGATGGGGAAGCGTGTCGATTTTTCGGCACGT 159359 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 || ||||| || || || || | | || |||||||||||||||| Sbjct 159358 ACTGTTATCACGGGAGACCCAAACTTATCGCTGGATGAAGTTGGTGTTCC 159309 >seq378 Length=483497 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282326 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 282385 || |||| || ||||||||||| || | ||| || ||||| ||||| || | || | | Sbjct 6906 TCCTGGTCCTTGTCAAGACCATAGGCCAGAGCGGCGGCAGTGGGTTCGTTGACAACACGC 6847 Query 282386 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 282445 | ||||| | |||||||||| ||| || || || || || || | || ||||||||| Sbjct 6846 ACGACATTCAAACCAGCAATTTGTCCAGCGTCCTTCGTAGCCTGACGCTGAGAATCGTTA 6787 Query 282446 AAATATGCAGGAACAGT 282462 || || || || ||||| Sbjct 6786 AAGTAGGCGGGGACAGT 6770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740610859881948