Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq383 131 3e-25 seq320 131 3e-25 seq98 127 4e-24 >seq383 Length=466833 Score = 131 bits (144), Expect = 3e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| || ||| || || | ||| || ||||| |||||||| || || || || | Sbjct 193493 TACCACCTCGCAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGG 193434 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || |||| || ||||| | ||| || || ||||| || || | ||| |||||||||| Sbjct 193433 AGAGGGTTCTGCCATCTTCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAG 193374 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| |||||||| || |||| ||||| || || || || || || | Sbjct 193373 GAATGCCCTCCTTGTCTTGAATTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGA 193314 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCA 82788 |||| | ||| || ||||| || |||| Sbjct 193313 CTTCAAGAGTGATTGTCTTTCCGGTCA 193287 Score = 131 bits (144), Expect = 3e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 82579 ACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAAT 82638 || |||| || | | ||| ||||| ||||| ||||| || || || || |||||||| | Sbjct 193952 ACATACCACCACGAAGACGGAGAACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGT 193893 Query 82639 CAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTG 82698 | | | | | || || || | || || ||||||||||| || | ||||||||||| Sbjct 193892 CGCTCAAAGTACGTCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTG 193833 Query 82699 GAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTT 82758 | || || || |||||||| || || || | || || || ||||| ||||| || || Sbjct 193832 GGGGGATACCCTCCTTATCCTGGATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATT 193773 Query 82759 CTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||||||||| || || || || || | || || ||||| |||||||| Sbjct 193772 CGACTTCCAAAGTAATGGTTTTTCCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| || ||| || || | ||| || || || || || || |||||||||||| Sbjct 193721 TACCACCTCGCAGACGAAGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCAC 193662 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | |||||| ||||| || || || || ||||| || | ||||| ||||| | Sbjct 193661 TCAAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGG 193602 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| |||||||| | || || || || |||||||| || || | Sbjct 193601 GGATGCCTTCCTTATCCTGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCGA 193542 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | ||| || || || || || | || || ||||| |||||||| Sbjct 193541 CCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 >seq320 Length=806987 Score = 131 bits (144), Expect = 3e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| ||||| || || || |||||||| || |||||||| || ||| | | ||| Sbjct 609727 ACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACC 609786 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | || || ||||||||||| | | || || |||||||| || || ||||| Sbjct 609787 ATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTT 609846 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| |||||||| | || ||||| || || || ||| || || || || | || || Sbjct 609847 ATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGAT 609906 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || ||||| || || || || || |||||| Sbjct 609907 AGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCATT 609943 Score = 116 bits (128), Expect = 7e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || ||||| || ||||| || || |||||||| || | | || || || || || Sbjct 609968 TGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCAAGCTGC 610027 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 |||||||| ||||| | || ||| || |||||||| || || ||||||||||| || || Sbjct 610028 TTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGGATTTTC 610087 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || || || ||||| || || | || || || | || || |||||||| || Sbjct 610088 GACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCGGTT 610147 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 || ||||| ||||| || |||||| Sbjct 610148 AAGGTCTTGACAAAGATTTGCATT 610171 Score = 98.7 bits (108), Expect = 2e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| ||||| | || || ||||| || || || || || ||||| | Sbjct 610453 TACCGCCACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTG 610512 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||||| || || || |||||||||||||| | | ||| |||||||||| Sbjct 610513 AGAGGGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAG 610572 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 | ||||| ||||| || |||||||| | || || || || || || || Sbjct 610573 GAATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATAGTGTC 610621 >seq98 Length=1126903 Score = 127 bits (140), Expect = 4e-24 Identities = 131/166 (79%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707 |||| || ||||| ||||| || |||||||| || | || || ||||| ||||| || | Sbjct 1023250 TTCTTCCATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATCC 1023309 Query 82708 CTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGT-TCTACTTC 82765 | ||||||||||| || |||||| || ||||| ||||| ||||| | || | ||||| || Sbjct 1023310 CCTCCTTATCTTGGAT-TTTGCTCTTGACATTGTCAATTGTATC-TGAGCTCTCTACCTC 1023367 Query 82766 CAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||| || || ||||| || ||||| ||||| || || ||||||||| Sbjct 1023368 CAAGGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATT 1023413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981822193294922