Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq320 109 5e-19 seq383 107 2e-18 seq98 86.0 6e-12 >seq320 Length=806987 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| || || |||||| | || ||| | ||||| | Sbjct 609737 AAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCA-TCCTCCAA 609795 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || | ||||||||||| ||||| || || ||||| || || Sbjct 609796 CTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAAT 609855 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||||| | | |||||| |||| ||||| || || || Sbjct 609856 CTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTTCC 609915 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| |||||| |||||||| ||||| Sbjct 609916 GGTCAAAGTTTTAACGAAAATTTGCAT 609942 Score = 107 bits (118), Expect = 2e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| || || |||||| | || ||| | ||||| || Sbjct 610193 AAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGGGTACGACCA-TCCTCAAG 610251 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| ||| |||| | ||||||||||| || |||||||| ||||| || ||| Sbjct 610252 TTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGAT 610311 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||||| | |||| || || | | |||||| |||| ||||| || ||||| Sbjct 610312 CTTTGACTTGACATTGTCAATAGTATCAGAAGACTCCACCTCGAGGGTGATTGTCTTGCC 610371 Query 133634 GGT 133636 || Sbjct 610372 AGT 610374 >seq383 Length=466833 Score = 107 bits (118), Expect = 2e-18 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||| ||||| || || ||||| ||||| | || || |||| |||||| |||||||| Sbjct 193690 GGTCGACTCCTTTTGGATATTATAATCACTCAAGGT--ACGACCGTCCTCTAGCTGCTTA 193633 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||| ||||| || |||||||||||||| || ||||| | Sbjct 193632 CCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGAATCTTACCC 193573 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | ||| || | | ||| || |||| || | ||||| ||||| || Sbjct 193572 TTCACGTTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTTACCGGTAAGG 193513 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || ||||||||||| Sbjct 193512 GTTTTGACAAAAATCTGCAT 193493 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||||||||| ||||| || ||| | ||| | || |||||||| Sbjct 193176 ATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCCATCTTCGAGCTG 193117 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 || || ||| |||| | ||||||||||| ||||| || ||||| ||||| |||||| Sbjct 193116 TTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCTTTGTCTTGGATCTT 193057 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | ||||| | || ||| || || | |||| ||| || ||||| Sbjct 193056 GCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACCTCCAAAGTGATGGTCTTTCCGGT 192997 >seq98 Length=1126903 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || ||||| ||||| || || | || | || |||||| || |||||||| || ||||| Sbjct 1023258 TCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATCCCCTCCTTA 1023317 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||| || ||||| | |||| || || | | ||| || || | ||||| | Sbjct 1023318 TCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCTCCAAGGTGATG 1023377 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||||| ||| || |||||||||||||| Sbjct 1023378 GTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCAT 1023412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418394981520