Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq383 113 4e-20 seq340 86.0 6e-12 >seq383 Length=466833 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| |||| ||||||| ||||| || || |||||||||| ||||| ||| || Sbjct 193930 AACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTCAAAGTACGTCCATCCTC 193871 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||| ||||| | | |||| ||||| ||||||||||| || || || || ||||| Sbjct 193870 CAACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGGATACCCTCCTTATCCTG 193811 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| || | | || | |||||||| | || ||||| | || | ||||| Sbjct 193810 GATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATTCGACTTCCAAAGTAATGGTTTT 193751 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || ||||| | ||||||||||| Sbjct 193750 TCCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| || || || || |||| |||||| || || ||||| ||||||| Sbjct 193686 GACTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCCTCTAGCTGCTTACCGGCG 193627 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || |||||||| ||||| || |||||||| ||||| ||| || |||| Sbjct 193626 AAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGAATCTTACCCTTCACG 193567 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | | ||| || |||| || | |||||||| || || ||||| Sbjct 193566 TTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTG 193507 Query 132110 ATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 193506 ACAAAAATCTGCAT 193493 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| |||| || | ||| | | | |||||||| || || || |||||| | || Sbjct 193194 ACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGT 193135 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||||||||||||||||| | || | |||||| || |||||||| || || Sbjct 193134 GCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCC 193075 Query 132022 TTCTTTATC 132030 |||||| || Sbjct 193074 TTCTTTGTC 193066 >seq340 Length=732193 Score = 86.0 bits (94), Expect = 6e-12 Identities = 240/364 (66%), Gaps = 11/364 (3%) Strand=Plus/Minus Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973 ||||| ||| || | ||| |||||| | ||||| |||||||| || || ||||| ||| Sbjct 107732 ATGCCTGGCTTGTCATTCTCAAACGAGCTCATCTCCCGCGACGAGGGCCTCCACACTGAC 107673 Query 46974 TTTGCGTGTCTCTATTACAAGACGCGCGTGAATGA--GAAATTAAACTCGGACACGATCC 47031 || || ||||| | | ||| | | |||| | | || ||| ||| | | Sbjct 107672 TTCGCCTGTCTGTTGTTCAAC---CACTTGAACAACCGCCCTT---CTCA-ACAGGCTGT 107620 Query 47032 TGAGCATGT--TTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCC 47089 | | || | || ||||| || |||| || | || || || |||| || || || Sbjct 107619 TCAAGATATCATTGTCGAGGCTGTTGGCATTGAGCAAGAATTCTTGACTGAAGCTCTTCC 107560 Query 47090 CGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGA 47149 || | ||||||||||| | || ||| | |||||||| ||||| || || Sbjct 107559 TTGTGCTCTTTTGGGCATGAACTCTAAGCTCATGAAGCAGTATATTGAATTTGTTGCCGA 107500 Query 47150 TCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTCGTAATCCGTTTGAGTT 47209 ||||| || || ||||| | || || | || ||||| ||| || || || || Sbjct 107499 CCGTCTTCTGTTGTCTCTCGGTAACCCAAAGTTTTACAATGCCACTAACCCATTCGACTT 107440 Query 47210 TATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 |||| | ||||| || | ||||||||||| || |||||||| || |||||||| || Sbjct 107439 TATGGAGTCTATTTCTCTTGCCGGCAAAACCAACTTCTTCGAGAAGCGTGTCGGAGACTA 107380 Query 47270 TAAG 47273 | || Sbjct 107379 TCAG 107376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608828859280