Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq287 100 4e-15 >seq287 Length=845177 Score = 100 bits (110), Expect = 4e-15 Identities = 217/320 (68%), Gaps = 6/320 (2%) Strand=Plus/Plus Query 332828 ATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCA 332887 |||||| | ||||| | || || || || |||||||| | || |||||||| Sbjct 538033 ATCTCGAGTAGGCGGTGGAGGACCTGCGCATCTGTGAGGCGGGAGTAACGGAGGATGGCG 538092 Query 332888 CAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTG-TTGCAGGCCAGGGCAAACCG 332946 || ||| |||| | |||||||| ||| | || |||||||| | || || || Sbjct 538093 CAGCGGGATTGCAACGGCTCGATGATT-TTGTTGCTCTGGTTGCAGGCAAACGCGAAGCG 538151 Query 332947 CGTCGT--ATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTG 333004 || || || |||| ||||||| || ||||||||||| |||||| ||| ||| Sbjct 538152 GGTGGTGGATGAGTATA--TTTCCATCGTGCGGCGGAGGGCCTGCTGGGCCCCCGCCGTC 538209 Query 333005 AGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTT 333064 | || |||||| || ||||| || | | ||| || | ||| | || || ||| | Sbjct 538210 ATGCTGTCGGCTTCATCGAGAATCACAACCTTCTGTCTTCCGGGTGGGAGCGTGACCTTC 538269 Query 333065 TTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCG 333124 ||| ||| |||||| || || || ||||| | |||||||||||||| ||| Sbjct 538270 TTCTGCGCGAATCCCTTGATGCGATTCCGGACCACGTCGATCCCGCGCTCGTCCGAAGCG 538329 Query 333125 TTGAGTTCGAGCACGGCCTC 333144 |||||||| ||||| || || Sbjct 538330 TTGAGTTCTAGCACTGCTTC 538349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177772812168476