Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq320 116 3e-21 seq383 93.3 4e-14 seq98 82.4 7e-11 >seq320 Length=806987 Score = 116 bits (128), Expect = 3e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||| ||||||| | || || | || |||| ||||||||| ||||| Sbjct 609751 CTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTCCAACTGCTTACCAGCAAA 609810 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | ||||| | |||||| ||| ||||| ||| | | | Sbjct 609811 GATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGACTTGACATT 609870 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || |||||||| | ||||| || || || ||||||||||| || Sbjct 609871 GTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTTCCGGTCAAAGTTTTAAC 609930 Query 35725 AAATATCTGCATTC 35738 || || ||||||| Sbjct 609931 GAAAATTTGCATTC 609944 Score = 100 bits (110), Expect = 3e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| | | ||| || |||| || |||||||| || ||||| Sbjct 610490 CTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAA 610549 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || ||||| || | ||||| | |||||||||| ||||| ||| | || Sbjct 610550 GATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGAATCTTAGACTTGA-CGT 610608 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | ||||| |||||||||||| | || || ||||| || || Sbjct 610609 TGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATGGTTTTTCCAGT 610657 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | || | ||| | ||| |||||| |||||||||||||| | Sbjct 609942 TTCCACCACGAAGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAG 610001 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | ||| || | || || |||||||| || || || ||||| || |||||||| | || Sbjct 610002 AGAGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAG 610061 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCC 35686 ||| | |||||| || ||| || ||| | |||| | | ||||| || || Sbjct 610062 GAATACCCTCCTTATCTTGGATTTTCGACTTGA-CGTTGTCAATGGTGTCCGAGGACTCG 610120 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||||| | ||||| || || || || || || || ||||| || ||||||| Sbjct 610121 ACCTCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCATTC 610172 >seq383 Length=466833 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| || || ||||| |||||| || |||| || ||||||||||| || || Sbjct 193684 CTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAA 193625 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||| | || | || ||||| ||| ||||| ||||| || Sbjct 193624 GATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGAATCTTACCCTTCA-CGT 193566 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||| || || || ||||| | || || |||||||| || | ||||| | Sbjct 193565 TGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGA 193506 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 193505 CAAAAATCTGCAT 193493 >seq98 Length=1126903 Score = 82.4 bits (90), Expect = 7e-11 Identities = 115/160 (72%), Gaps = 6/160 (4%) Strand=Plus/Plus Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || || ||||| || ||||||||||||| |||||| |||| ||| | | |||||| Sbjct 1023258 TCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATCCCCTCCTTA 1023317 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTG 35698 || ||| || ||| | | | | | || || |||| || ||||||| ||| Sbjct 1023318 TCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTC---TCTACCTCCAAGGTG 1023374 Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || || || || |||||||| ||||| || |||||||||| Sbjct 1023375 ATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATTC 1023414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791357301840