Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq342 116 5e-21 >seq342 Length=727325 Score = 116 bits (128), Expect = 5e-21 Identities = 343/529 (65%), Gaps = 0/529 (0%) Strand=Plus/Plus Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 ||||| | |||||||| || | || || || | | | || |||| || || |||||| Sbjct 61118 ATATCCGCGTGCCATGGCTCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCC 61177 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | || ||||| || | |||| | ||||| | ||| || | ||| || ||||| Sbjct 61178 TGGTCAACATACCTGGCGGTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAA 61237 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 ||||||| || || | |||||| || | || ||||| ||| || || Sbjct 61238 CTACCATTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAGTGAATGTTGAGTCCA 61297 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || || |||| || || | |||||| || | || || || ||||| || Sbjct 61298 ATACCGCCAGCAGTTTTTGAAATCATAGCACAGGTCTTAAGGGTATCGTAAATACCATCA 61357 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 || || || |||| ||| | |||||| || | |||| | | || || Sbjct 61358 ATCGAGTCCCCTTTCATAGTAACCAAGAAACAGGACGAGAGTTGAGGCGATGGTGTGCCT 61417 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 ||||| || | ||||| || || || || || | ||| ||| || || ||||| Sbjct 61418 GCATTGAAGAGAGTAGGCGAAGCATGGGTAAAATACTTTGAAGACGTGAGGTTATATGTC 61477 Query 70057 TCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116 || ||| | || | |||| ||||||||| | || |||||||| | ||||||| Sbjct 61478 TCGATAACCTTGTCGACATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATATGC 61537 Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176 ||||| || || | ||| ||| || | ||||| || |||| |||||| Sbjct 61538 TGAGGACGCTCAGCAACTTTTCCATTGATGCGAAGAAGGTACGAACGCTCCAAAGTTTTG 61597 Query 70177 AACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAAT 70225 || ||||| || ||||| ||| || | ||||| ||||| |||||| Sbjct 61598 AAGCCAAAGTAATTGTAGTTAAAATCCTTATCGTAGATAATGGCAGAAT 61646 Score = 109 bits (120), Expect = 8e-19 Identities = 361/549 (66%), Gaps = 27/549 (5%) Strand=Plus/Plus Query 69099 CAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTC--AGCTTCT 69156 ||| || ||||| |||| ||| | ||||||||| ||| | || | |||| ||| || Sbjct 60457 CAAACCTTGAACACCAACACCAACAGGTCTATGCCTCGTGTT--ACTTTTCCTAGCCTCA 60514 Query 69157 GGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACC 69216 || | ||||| | || | ||| || || || || || ||| || || || || | Sbjct 60515 GGGACGGGATAGAAGTTGACATCGATGATCTTGTTGAGGTTTTTGATGACGACCTTGGTC 60574 Query 69217 ACGTCCTTTAGTTTGAGAAAATCAAA-TCGTCCATCTATAACA--AACATATTCAGT--- 69270 || || | | ||| ||||| | ||| || ||| |||| ||||||| || Sbjct 60575 ACCTCGTGCAACTTGGCGAAATCGTACTCGCCCCTCTG-AACATCAACATATGTAGGCAA 60633 Query 69271 -GCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA---TATTGTATTAT 69326 || | ||||| | |||||||||||| ||||||| || |||| || | | || Sbjct 60634 GGCCAACGATGCCAAATTACAAACTGCGACCTCATCAGG---TGCACTATACTCCACAAT 60690 Query 69327 CTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTT 69386 ||| ||||| ||||| || | || || |||| || ||||| || || ||| Sbjct 60691 CTCGGTACAGAGATTGGACGATCTAATGGTTCCCAAGTTCTGCTGGTTGGATTTGCGGTT 60750 Query 69387 ACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGA 69446 ||| ||||||||||| || || || || | ||||| ||| | || | ||||| ||| Sbjct 60751 ACATGCGTCCTTGTAGAGCATGAAAGGGTTGCCAGTCTCAGTTTGGGCTTCGAGAATGTG 60810 Query 69447 TTTCCAAACGACCCTAGCATTTATTACGGTCTT----GTAACG-CTTCTCT-TTTTCATA 69500 | ||| | | || || | | |||||| | || | ||| | || ||||| Sbjct 60811 ATACCAGA--GTTTTTGCGCTT-TGATGGTCTTGCGAGCAAGGTCTTTAGTATTCTCATA 60867 Query 69501 TTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATT 69560 || |||| || |||||||| || |||||||| || |||| || || |||||| Sbjct 60868 TTTGTTATAGAGAGCCTCGAATTCTTCACCCCAAACGTCGGCCAAACCTGGGGCTTCATT 60927 Query 69561 TGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAAT 69620 ||||| | | |||| | ||| ||| ||||| ||||| |||||||| || || Sbjct 60928 AGGACAAAAGAGGCTCCACTCGGCATTTGCCTCAACTCTCTTCATGAATAGATCAGGGAT 60987 Query 69621 CCAAAGAGC 69629 ||||||||| Sbjct 60988 CCAAAGAGC 60996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905382628720