Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq342 89.7 6e-13 >seq342 Length=727325 Score = 89.7 bits (98), Expect = 6e-13 Identities = 232/351 (66%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-- 111118 |||||||||||| | ||||| |||||| || | | | ||| |||| | || |||| Sbjct 60460 ACCTTGAACACCAACACCAACAGGTCTATGCCTCGTGTTA--CTTTTCCT-AGCCTCAGG 60516 Query 111119 -ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 111177 |||||||| || || || |||| ||| || |||||| | || | ||| || | Sbjct 60517 GACGGGATAGAAGTTGACATCGATGATCTTGTTGAGGTTTTTGATGACGACCTTGGTCAC 60576 Query 111178 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 111237 || || | || | |||| | || ||| ||| ||||| | || | ||| Sbjct 60577 CTCGTGCAACTTGGCGAAATCGTACTCGCCCCTCTGAACATCAACATATGTAGGCAAGGC 60636 Query 111238 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 111297 | ||||||||||| ||||| || |||||| | | ||||| | ||| || || Sbjct 60637 CAACGATGCCAAATTACAAACTGCGACCTCATCAGGTGCACTATACTCCACAATCTCGGT 60696 Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357 ||| | ||||| |||| || ||||| |||| ||||| || ||| || || Sbjct 60697 ACAGAGATTGGACGATCTAATGGTTCCCAAGTTCTGCTGGTTGGATTTGCGGTTACATGC 60756 Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||||||||||||||| | || | || ||||| || || | || |||||| Sbjct 60757 GTCCTTGTAGAGCATGAAAGGGTTGCCAGTCTCAGTTTGGGCTTCGAGAAT 60807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028875540800