Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq320 174 2e-38 seq383 170 2e-37 seq98 95.1 1e-14 seq349 86.0 7e-12 >seq320 Length=806987 Score = 174 bits (192), Expect = 2e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||||||||| | ||||||||||| || || || ||||| ||||| Sbjct 610171 AATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACAATCACCCTCGAGGTCGAGTCCTC 610112 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| || | ||| | ||||| || || |||||||| |||||||||||||| Sbjct 610111 GGACACCATTGACAACGTCAAGTCGAAAATCCAAGATAAGGAGGGTATTCCTCCAGACCA 610052 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| || | || || ||||| ||||| || ||||||| |||||||| | || || || Sbjct 610051 GCAACGATTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTCTCTGATTACAA 609992 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| || || |||||||| ||| | || ||||| |||||| Sbjct 609991 CATTCAGAAGGAGTCTACCCTTCATCTCGTCCTTCGACTTCGTGGTGGA 609943 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || | ||||| |||||||| || || ||||| ||||| Sbjct 609943 AATGCAAATTTTCGTTAAAACTTTGACCGGAAAGACTATCACCCTCGAGGTGGAGTCTTC 609884 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | ||| | ||| | || |||||||| |||||||| |||||||||||||| Sbjct 609883 TGACACAATCGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCA 609824 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| | || |||||||||||||| | ||||||| |||||| || | || ||||| Sbjct 609823 GCAGCGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGTACTCTTTCCGATTATAA 609764 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || ||||| ||||| | || | |||||||| || || Sbjct 609763 CATTCAGAAAGAGTCCACCCTTCACTTGGTTCTTCGTCTTCGTGGCGG 609716 Score = 145 bits (160), Expect = 9e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || || || ||||| |||||||| || || || | || | || | ||| || Sbjct 610657 ACTGGAAAAACCATTACCCTTGAGGTGGAATCGTCGGACACTATCGACAACGTCAAGTCT 610598 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||||||||||||||| ||||| ||| | || |||||||| ||| Sbjct 610597 AAGATTCAGGACAAGGAGGGAATTCCTCCAGATCAGCAACGTTTGATCTTTGCTGGAAAG 610538 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | || ||||| |||| || || |||||||||| || || |||||| Sbjct 610537 CAGCTTGAGGACGGACGCACCCTCTCAGATTACAACATCCAAAAGGAGTCTACCCTTCAT 610478 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | |||||||| || || Sbjct 610477 CTTGTTCTCCGTCTTCGTGGCGG 610455 Score = 143 bits (158), Expect = 3e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||| ||||| ||||| |||| ||| | ||| | Sbjct 610374 ACTGGCAAGACAATCACCCTCGAGGTGGAGTCTTCTGATACTATTGACAATGTCAAGTCA 610315 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| |||||||| || || |||||||||||||| | ||||| || || ||| Sbjct 610314 AAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAGCAGCGCTTGATTTTCGCCGGCAAG 610255 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||||| ||||||||| | || ||||| | || || || ||||| ||||| Sbjct 610254 CAACTTGAGGATGGTCGTACCCTTTCCGATTATAACATTCAGAAAGAGTCCACCCTTCAC 610195 Query 27610 CTAGTCTTGCGTCTTCGCGGTGGA 27633 | || | |||||||| || ||| Sbjct 610194 TTGGTTCTTCGTCTTCGTGGCGGA 610171 >seq383 Length=466833 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct 193493 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCG 193552 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || |||||| ||| |||||||| ||||| || || || |||||||| Sbjct 193553 GATACGATCGACAACGTGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 193612 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || |||||||| || ||||| | ||||||| | || |||||| Sbjct 193613 CAGCGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTACCTTGAGTGATTATAAT 193672 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| || || || || || ||| | ||||| || ||||| Sbjct 193673 ATCCAAAAGGAGTCGACCCTCCACCTTGTCCTTCGTCTGCGAGGTGG 193719 Score = 156 bits (172), Expect = 5e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || ||||| || || || |||||| | || || || || Sbjct 193721 ATGCAGATTTTTGTCAAAACCCTTACTGGAAAAACCATTACTTTGGAAGTCGAATCTTCC 193780 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | |||| |||||| ||||| |||||||| || || ||||| || Sbjct 193781 GATACTATTGACAACGTCAAGGGTAAAATCCAGGATAAGGAGGGTATCCCCCCAGATCAA 193840 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || ||||| || |||||||||||||| | ||||||| ||||| | ||| |||||||| Sbjct 193841 CAACGTCTTATCTTTGCTGGTAAGCAGTTGGAGGATGGACGTACTTTGAGC-GACTATAA 193899 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||||| || ||||| || | || | |||||||| ||||| Sbjct 193900 TATCCAAAAGGAGTCAACTCTACACTTGGTTCTCCGTCTTCGTGGTGG 193947 Score = 149 bits (164), Expect = 7e-31 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487 ||||||| ||||| || ||| | ||||||||||| || | ||| | ||| ||||| Sbjct 192995 TTACCGGAAAGACCATCACTTTGGAGGTTGAGTCCTCGGACACCATCGACAATGTGAAGA 193054 Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547 || || || ||||| || || ||||||||||||||||||||| | ||||| || |||| Sbjct 193055 GCAAGATCCAAGACAAAGAAGGGATTCCTCCAGACCAGCAGCGTTTGATTTTCGCCGGTA 193114 Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607 | || ||||| |||| || || || | ||||||||| |||| || || || || |||| Sbjct 193115 AACAGCTCGAAGATGGGCGCACTCTCTCCGACTATAATATCCAGAAAGAGTCTACCCTTC 193174 Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||| ||||||| || || || Sbjct 193175 ATCTTGTCCTGCGTCTGCGTGGCGG 193199 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || |||||||| || ||||| || | || | ||| | || | Sbjct 193289 ACCGGAAAGACAATCACTCTTGAAGTCGAGTCTTCGGACACAATCGATAATGTCAAAGGC 193348 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 |||||||| ||||||||||| ||||||||||| ||||| ||||| || ||||| || ||| Sbjct 193349 AAAATTCAAGACAAGGAGGGCATTCCTCCAGATCAGCAACGTCTGATATTTGCCGGCAAG 193408 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||| | || |||| | ||||| | ||||| || | || || || || || || || Sbjct 193409 CAATTGGAAGATGGCAGAACCCTCTCCGACTACAACATTCAGAAAGAGTCTACCCTCCAC 193468 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || ||||| Sbjct 193469 CTTGTCCTTCGTCTGCGAGGTGG 193491 >seq98 Length=1126903 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| | ||||| ||||| || || | ||||| ||| || Sbjct 1023413 AATGCAGATTTTCGTGAAGACTTTGACCGGGAAGACCATCACCTTGGAGGTAGAG--AGC 1023356 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| |||| ||| | ||| ||||| || || |||||||| || ||||| || Sbjct 1023355 TCAGATACAATTGACAATGTCAAGAGCAAAATCCAAGATAAGGAGGGGATCCCTCCGGAT 1023296 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 |||||| | | || |||||||| ||||||||||| |||| Sbjct 1023295 CAGCAGAGGTTGATATTTGCTGGGAAGCAACTCGAAGATG 1023256 >seq349 Length=649591 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 27497 AGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCG 27556 |||||||||||||||| || ||||||||||||||| | || || || || ||||| || | Sbjct 306081 AGGACAAGGAGGGAATCCCCCCAGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTAG 306022 Query 27557 AGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 |||||| | ||||| | ||||| || ||||||| Sbjct 306021 AGGATGGAAGGACCCTTTCGGACTACAACATCCAAAA 305985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307562705760