Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq344 91.5 1e-13 >seq344 Length=693110 Score = 91.5 bits (100), Expect = 1e-13 Identities = 228/343 (66%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 || ||||| |||| || ||||||||| | ||| | ||||||||| ||| || | | Sbjct 554787 GGATTCCAAGCGCTCATGATGATGCGGCGGTCGTAGGGGTTGTTCTTGAGCTTGTATATG 554728 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30238 ||| ||||||||||| ||| ||||||||||| | ||| ||||| | Sbjct 554727 ACGTCGGCGAGCTGATCCACGCCCTGGCCCGAGTAGTCCGTGTGGCAGTCGACGTACTTT 554668 Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 || || || |||| |||||| || ||||| || || |||||||| ||||| | | | | Sbjct 554667 GCGCCAAAGTGCCGCCACTGAAATCCGTAGACGGGGCCCAGGTCACCCTCCGCGCGCTCC 554608 Query 30299 -TCGAAGCCC-CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356 || ||||| | |||||| | | | || ||||| | ||||||||||| || | Sbjct 554607 GTC--AGCCCGATGCTGTCCAGGTAAGCGCGCGACCCGTTTCCCTCCCAGATCTTCACGC 554550 Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416 || | |||||| | | | || || || | |||||| || ||||| | | Sbjct 554549 CCACGGCCGAGAGCGGGGCGTTGCTGGTCGAGCCCGAAATGAACCAGAGGAGCTCGTGAA 554490 Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 || ||| || |||| | ||| ||||| |||||||| || Sbjct 554489 GGATGGCTTTGTGGAAGAGGCGCTTTGTCGTCAGGAGGGGGAA 554447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308429140616