Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq383 136 3e-27 seq320 98.7 9e-16 >seq383 Length=466833 Score = 136 bits (150), Expect = 3e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||| ||| | || ||||||||||| || | || ||| | || || | |||||| Sbjct 193287 TGACCGGAAAGACAATCACTCTTGAAGTCGAGTCTTCGGACACAATCGATAATGTCAAAG 193346 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 |||||||||||||| || ||||| || || ||||| || ||| | |||| ||||||| Sbjct 193347 GCAAAATTCAAGACAAGGAGGGCATTCCTCCAGATCAGCAACGTCTGATATTTGCCGGCA 193406 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | ||||||||||| | ||| | ||||| ||||||||||| || ||||| ||| | | Sbjct 193407 AGCAATTGGAAGATGGCAGAACCCTCTCCGACTACAACATTCAGAAAGAGTCTACCCTCC 193466 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | | || | ||| |||| ||||| || Sbjct 193467 ACCTTGTCCTTCGTCTGCGAGGTGGTAT 193494 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || ||||| || |||||||||| || || || | || Sbjct 193493 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCG 193552 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || || ||||| || || |||||||| || || || ||| Sbjct 193553 GATACGATCGACAACGTGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 193612 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | || ||| || ||| | ||||| || Sbjct 193613 CAGCGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTACCTTGAGTGATTATAAT 193672 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||||||| | || | || | ||| |||| ||||| || Sbjct 193673 ATCCAAAAGGAGTCGACCCTCCACCTTGTCCTTCGTCTGCGAGGTGGTAT 193722 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || || | |||||| | ||||| ||| | ||| Sbjct 193721 ATGCAGATTTTTGTCAAAACCCTTACTGGAAAAACCATTACTTTGGAAGTCGAATCTTCC 193780 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| ||||| || || || || || || || || |||||| Sbjct 193781 GATACTATTGACAACGTCAAGGGTAAAATCCAGGATAAGGAGGGTATCCCCCCAGATCAA 193840 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || || || || ||||| || | || | ||| || || Sbjct 193841 CAACGTCTTATCTTTGCTGGTAAGCAGTTGGAGGATGGACGTACTTTGAGCGACTATAAT 193900 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || |||| |||||| | ||| | || ||||| || Sbjct 193901 ATCCAAAAGGAGTCAACTCTACACTTGGTTCTCCGTCTTCGTGGTGGTAT 193950 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||| ||| | || ||| | || || || | || ||| | || || | || || Sbjct 192997 ACCGGAAAGACCATCACTTTGGAGGTTGAGTCCTCGGACACCATCGACAATGTGAAGAGC 193056 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || |||||||||||||| || || || || || |||||||| || | |||||| ||| Sbjct 193057 AAGATCCAAGACAAAGAAGGGATTCCTCCAGACCAGCAGCGTTTGATTTTCGCCGGTAAA 193116 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | ||||| | || | ||||| || || || || || ||||| ||| | ||| Sbjct 193117 CAGCTCGAAGATGGGCGCACTCTCTCCGACTATAATATCCAGAAAGAGTCTACCCTTCAT 193176 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || ||||| |||| || || || Sbjct 193177 CTTGTCCTGCGTCTGCGTGGCGGTAT 193202 >seq320 Length=806987 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 ||||| ||||| |||||| |||| ||| | || || | ||||| || ||||| ||| Sbjct 610645 ATTACCCTTGAGGTGGAATCGTCGGACACTATCGACAACGTCAAGTCTAAGATTCAGGAC 610586 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 || || || || || || ||||| || ||||| || | || || || || | || ||| Sbjct 610585 AAGGAGGGAATTCCTCCAGATCAGCAACGTTTGATCTTTGCTGGAAAGCAGCTTGAGGAC 610526 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 | ||| | || ||||||||||| ||||||||||| ||| | ||| | ||| | ||| Sbjct 610525 GGACGCACCCTCTCAGATTACAACATCCAAAAGGAGTCTACCCTTCATCTTGTTCTCCGT 610466 Query 27204 TTGCGGGGTGGCAT 27217 | || || || || Sbjct 610465 CTTCGTGGCGGTAT 610452 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || | ||||||||| | || || || || || || | || Sbjct 610170 ATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACAATCACCCTCGAGGTCGAGTCCTCG 610111 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||||| ||||| || || || || || || || || Sbjct 610110 GACACCATTGACAACGTCAAGTCGAAAATCCAAGATAAGGAGGGTATTCCTCCAGACCAG 610051 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| || || || | || || | ||| | || ||||||||| Sbjct 610050 CAACGATTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTCTCTGATTACAAC 609991 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | ||| | || | || | || ||||| || Sbjct 609990 ATTCAGAAGGAGTCTACCCTTCATCTCGTCCTTCGACTTCGTGGTGGAAT 609941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916236280960