Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq344 140 3e-28 >seq344 Length=693110 Score = 140 bits (154), Expect = 3e-28 Identities = 327/490 (67%), Gaps = 24/490 (5%) Strand=Plus/Plus Query 34309 GCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA 34368 ||||||| || ||| |||||||||||||| | ||||||| || | | ||||||| Sbjct 554536 GCTCTCGGCCGTGGGCGTGAAGATCTGGGAGGGAAACGGGTCGCGCGCTTACCTGGACAG 554595 Query 34369 GCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAG 34428 ||| | | || | |||||| ||| ||||||| |||||||| || |||||| | Sbjct 554596 CATCGGGCTGACGGAGCGCGCGGAGGGTGACCTGGGCCCCGTCTACGGATTTCAGTGGCG 554655 Query 34429 ACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCA 34488 |||||||| || |||| | || | ||||||| ||||| ||||| | ||| || Sbjct 554656 GCACTTTGGCGCAAAGTACGTCGACTGCCACACGGACTACTCGGGCCAGGGCGTGGATCA 554715 Query 34489 GCT-GCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGT 34547 ||| || | |||| || ||| | ||| ||||| | ||| | | ||| | ||| Sbjct 554716 GCTCGCCG-ACGTCATATACAAGCTCAAGAACAACCCCTACGACCGCCGCATCATCATGA 554774 Query 34548 GCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCC 34607 |||| ||||| ||| |||||| | ||||||| | || ||||| |||| | || Sbjct 554775 GCGCTTGGAATCCGGCGGATCTGGCGAAGATGGCGTTGCCGCCGTGTCACATGTTTGCCC 554834 Query 34608 AATTCTACGTCGCG------------------AATGGGGAGCTGTCCTGCCAGCTCTATC 34649 ||||||| ||| || | |||| |||| || | | |||| Sbjct 554835 AATTCTATGTCTCGTACAAGGAGGGGAAAGGTATGGGGGCGCTGAGTTGTGTGTTGTATC 554894 Query 34650 A-ACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTC 34708 | | || | | || |||||| | || || ||||| || || ||| ||||| || ||| Sbjct 554895 AGAGGAGC-TGTGATATGGGGCTTGGTGTCCCGTTTAATATCGCTTCGTACGCGCTCCTC 554953 Query 34709 ACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGG 34767 ||| ||||| || ||||| ||| || ||| ||||||||| | | || || |||| Sbjct 554954 ACGATAATGATTGCGCATGT-GTGTGGCCTGGAGCCTGGGGAGTTTATACACACTATGGG 555012 Query 34768 GGATGCGCAT 34777 |||||||||| Sbjct 555013 GGATGCGCAT 555022 Score = 140 bits (154), Expect = 3e-28 Identities = 327/490 (67%), Gaps = 24/490 (5%) Strand=Plus/Minus Query 6568 ATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCC-CACGACATGAGCGA 6626 |||||||||||||| || || | | ||||||||| ||| || ||| ||||| || | Sbjct 555022 ATGCGCATCCCCCATAGTGTGTATAAACTCCCCAGGCTCCAGGCCACAC-ACATGCGCAA 554964 Query 6627 TCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTC 6686 |||| |||||| || ||||| ||| || || ||||| || || | |||||| || | Sbjct 554963 TCATTATCGTGAGGAGCGCGTACGAAGCGATATTAAACGGGACACCAAGCCCCATATCAC 554904 Query 6687 CCGATCGT-TGATAGAGCTGGCAGGACAGCTCCCCATT------------------CGCG 6727 | || | ||||| | | || |||| |||| | || | Sbjct 554903 A-GCTCCTCTGATACAACACACAACTCAGCGCCCCCATACCTTTCCCCTCCTTGTACGAG 554845 Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 || ||||||||| | |||| ||||| || | ||||||| | |||||| ||| Sbjct 554844 ACATAGAATTGGGCAAACATGTGACACGGCGGCAACGCCATCTTCGCCAGATCCGCCGGA 554785 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 ||||| |||| ||| | ||| | | ||| | ||||| ||| | ||| || ||| Sbjct 554784 TTCCAAGCGCTCATGATGATGCGGCGGTCGTAGGGGTTGTTCTTGAGCTTGTATATGACG 554725 Query 6848 TACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGC 6906 | | || ||||| ||| | ||||| ||||| ||||||| | || | |||| || Sbjct 554724 T-CGGCGAGCTGATCCACGCCCTGGCCCGAGTAGTCCGTGTGGCAGTCGACGTACTTTGC 554666 Query 6907 CCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGG 6966 |||||||| | |||||| || |||||||| ||||||| ||| |||||| | || | Sbjct 554665 GCCAAAGTGCCGCCACTGAAATCCGTAGACGGGGCCCAGGTCACCCTCCGCGCGCTCCGT 554606 Query 6967 GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCG 7026 | ||| ||||||| | | || ||||||| | |||||||||||||| ||| Sbjct 554605 CAGCCCGATGCTGTCCAGGTAAGCGCGCGACCCGTTTCCCTCCCAGATCTTCACGCCCAC 554546 Query 7027 GGACGAGAGC 7036 || ||||||| Sbjct 554545 GGCCGAGAGC 554536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260169894560