Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq383 161 2e-34 seq320 159 8e-34 seq349 102 2e-16 seq98 86.0 1e-11 >seq383 Length=466833 Score = 161 bits (178), Expect = 2e-34 Identities = 165/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 ||||||||||| || || ||||| |||||||| |||||||| | ||||| | | || || Sbjct 193704 AGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCACTCAAGG-TACGACCGTC 193646 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || |||||||| || |||||||||||||| |||||||| || || | |||||||| || Sbjct 193645 CTCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATC 193586 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||| ||||| |||||||| ||||| || || || || ||||||||||| || || Sbjct 193585 CTGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGT 193526 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || ||||| | |||||| Sbjct 193525 TTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| ||||| || |||||||| ||||| ||||| || | || || | |||||| Sbjct 193184 AGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCCATCT 193125 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || ||||| || | || || ||||| ||||||| ||||| ||||| Sbjct 193124 TCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCTTTGTCT 193065 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||| ||| |||||||| | |||||| ||| Sbjct 193064 TGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACCTCCAAAGTGATGGTC 193005 Query 211083 TTTCCCGT 211090 ||||| || Sbjct 193004 TTTCCGGT 192997 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || |||||||| || ||||| || || | ||||| || |||||| Sbjct 193476 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCT 193417 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||||| || || || || ||||| || || ||||||| || |||||||| Sbjct 193416 TCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCT 193357 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || ||| || || ||||| ||||| || || || || |||||||| ||| Sbjct 193356 TGAATTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTGTC 193297 Query 211083 TTTCCCGT 211090 ||||| || Sbjct 193296 TTTCCGGT 193289 >seq320 Length=806987 Score = 159 bits (176), Expect = 8e-34 Identities = 169/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | |||||| ||||||||||| || ||||||||||| | ||| || Sbjct 609721 ACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGT 609780 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||| |||||| || || ||||| | ||| || ||||| ||||||| || Sbjct 609781 ACGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACC 609840 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| ||||| ||||| || || || ||||| |||||||| || |||||||| Sbjct 609841 CTCCTTATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAG 609900 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| |||||||| || | ||| || || || | |||||| Sbjct 609901 GGTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCATT 609943 Score = 149 bits (164), Expect = 1e-30 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| ||||| || ||||| ||||||||||| ||||| | ||||| Sbjct 610460 ACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGT 610519 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||| || || |||||||| || || ||||| | ||||| || || ||||||| ||| Sbjct 610520 GCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCC 610579 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| || ||||| ||||| ||||| || ||| ||||| || Sbjct 610580 CTCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAG 610639 Query 211073 AGTGATCGTCTTTCCCGTGA 211092 || || || ||||| |||| Sbjct 610640 GGTAATGGTTTTTCCAGTGA 610659 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | |||||| ||||||||||| || ||||||||||| | |||||| Sbjct 610177 ACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGGGT 610236 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || || |||||||| ||||| || | ||| || ||||| || || | || Sbjct 610237 ACGACCATCCTCAAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGGGGGATGCC 610296 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| |||||||||||| || || || || || || ||||| || |||||||| Sbjct 610297 CTCCTTATCCTGGATCTTTGACTTGACATTGTCAATAGTATCAGAAGACTCCACCTCGAG 610356 Query 211073 AGTGATCGTCTTTCCCGT 211090 ||||| ||||| || || Sbjct 610357 GGTGATTGTCTTGCCAGT 610374 >seq349 Length=649591 Score = 102 bits (112), Expect = 2e-16 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 ||||||||||||| || |||| ||||||||||||||| || |||||||| || ||||||| Sbjct 305983 CTTTTTGGATGTTGTAGTCCGAAAGGGTCCTTCCATCCTCTAGCTGCTTTCCGGCGAAGA 306042 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCT 211023 | | || || ||||| || || | ||| |||||||||| Sbjct 306043 TCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCT 306081 >seq98 Length=1126903 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 210951 GTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACT 211010 || ||||||||||| || ||||| || || || || | | || || || ||||| | Sbjct 1023249 GTTCTTCCATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATC 1023308 Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||| || ||||| || || || || || || || || ||||| || ||||| Sbjct 1023309 CCCTCCTTATCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCTCC 1023368 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||||| ||||| || || | |||||| || || | ||||||| Sbjct 1023369 AAGGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATT 1023413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146089049270