Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq383 113 3e-20 seq320 100 2e-16 >seq383 Length=466833 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||||| || |||||||| || ||| | ||||| || || | Sbjct 193721 ATGCAGATTTTTGTCAAAACCCTTACTGGAAAAACCATTACTTTGGAAGTCGAATCTTCC 193780 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||| | | || ||||| || || || ||| | || ||||||||| Sbjct 193781 GATACTATTGACAACGTCAAGGGTAAAATCCAGGATAAGGAGGGTATCCCCCCAGATCAA 193840 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || || || |||| || | ||| ||||| |||| || || Sbjct 193841 CAACGTCTTATCTTTGCTGGTAAGCAGTTGGAGGATGGACGTACTTTGAGCGACTATAAT 193900 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || ||||| ||||| || |||| || ||| Sbjct 193901 ATCCAAAAGGAGTCAACTCTACACTTGGTT 193930 Score = 96.9 bits (106), Expect = 2e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 23635 ACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAAACAA 23694 || ||||| || |||||||| ||||| || || ||||||| | || | | ||| Sbjct 193289 ACCGGAAAGACAATCACTCTTGAAGTCGAGTCTTCGGACACAATCGATAATGTCAAAGGC 193348 Query 23695 AAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAA 23754 |||||| ||||| || || | || |||||||| || ||| | |||||||||||||| Sbjct 193349 AAAATTCAAGACAAGGAGGGCATTCCTCCAGATCAGCAACGTCTGATATTTGCCGGCAAG 193408 Query 23755 CAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCAC 23807 ||| ||||||| | | || | ||| |||||||| || |||||||| || Sbjct 193409 CAATTGGAAGATGGCAGAACCCTCTCCGACTACAACATTCAGAAAGAGTCTAC 193461 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||||| || || ||||| || |||||||| || || || || Sbjct 193493 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCG 193552 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | | || || ||| || || ||||| | || ||||| ||| Sbjct 193553 GATACGATCGACAACGTGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 193612 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || ||||| || || || || |||| || || || | ||||| || Sbjct 193613 CAGCGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTACCTTGAGTGATTATAAT 193672 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 193673 ATCCAAAAGGAGTCGAC 193689 Score = 91.5 bits (100), Expect = 1e-13 Identities = 126/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 23635 ACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACA 23693 || ||||| || |||||| | || ||||| ||| ||||||| | || ||| | || | Sbjct 192997 ACCGGAAAGACCATCACTTTGGAGGTTGAGTCCTCGGACACCATCGACAATGTGAAGAGC 193056 Query 23694 AAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAA 23753 || | | ||||||||||| | || ||||| || |||||||| || || ||||| || Sbjct 193057 AAGA-TCCAAGACAAAGAAGGGATTCCTCCAGACCAGCAGCGTTTGATTTTCGCCGGTAA 193115 Query 23754 ACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCAC 23807 ||| || ||||| | |||||| | ||| || || || || |||||||| || Sbjct 193116 ACAGCTCGAAGATGGGCGCACTCTCTCCGACTATAATATCCAGAAAGAGTCTAC 193169 >seq320 Length=806987 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||||||||| | || ||||| || ||||| ||||| || || || | Sbjct 609943 AATGCAAATTTTCGTTAAAACTTTGACCGGAAAGACTATCACCCTCGAGGTGGAGTCTTC 609884 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | || | || | || || || || ||| | || ||||| | Sbjct 609883 TGACACAATCGACAATGTCAAGTCGAAGA-TTCAGGATAAGGAGGGTATTCCTCCAGACC 609825 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||||| || || ||||| || || || |||| || | || ||| | |||||| | Sbjct 609824 AGCAGCGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGTACTCTTTCCGATTATA 609765 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||| || ||||||||||| | || || ||| Sbjct 609764 ACATTCAGAAAGAGTCCACCCTTCACTTGGTT 609733 Score = 87.8 bits (96), Expect = 1e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 23633 TCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAAAC 23692 |||| |||||||| || || || || || || || |||||||| | || | | || Sbjct 610659 TCACTGGAAAAACCATTACCCTTGAGGTGGAATCGTCGGACACTATCGACAACGTCAAGT 610600 Query 23693 AAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCA 23752 || ||| ||||| || || | || |||||||| || ||||| || ||||| || | Sbjct 610599 CTAAGATTCAGGACAAGGAGGGAATTCCTCCAGATCAGCAACGTTTGATCTTTGCTGGAA 610540 Query 23753 AACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTAC 23812 | || || || |||| |||||| | ||||||||||| ||||| ||||| || | | Sbjct 610539 AGCAGCTTGAGGACGGACGCACCCTCTCAGATTACAACATCCAAAAGGAGTCTACCCTTC 610480 Query 23813 ATTTAGTT 23820 || | ||| Sbjct 610479 ATCTTGTT 610472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007960442184