Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq383 145 2e-29 seq320 136 9e-27 seq98 100 7e-16 seq342 93.3 1e-13 >seq383 Length=466833 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||||||||| || || || || ||||| |||| ||| || |||| | ||| Sbjct 193194 ACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGT 193135 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||| ||||| || || ||||| || | || || ||||| || ||||| || Sbjct 193134 GCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCC 193075 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| |||||||||||||| ||||||| ||||||||||| |||| || || || || Sbjct 193074 TTCTTTGTCTTGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACCTCCAA 193015 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 193014 AGTGATGGTCTTTCCGGT 192997 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || || || ||||||| ||| ||||| ||| || | || || Sbjct 193704 AGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCC 193645 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| || ||||||||||| || |||||||| || || || |||||||| || Sbjct 193644 TCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCC 193585 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| ||||| || || || | || || || | || || || Sbjct 193584 TGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTT 193525 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || || | ||||| Sbjct 193524 TTACCGGTAAGGGTTTT 193508 Score = 116 bits (128), Expect = 9e-21 Identities = 142/192 (74%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || || ||||| || | ||||| |||| | ||||| |||||| Sbjct 193476 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCT 193417 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | ||||| || || || || || ||||| || || || ||||| || ||||||||| Sbjct 193416 TCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCT 193357 Query 225622 TGGATCTTTTGC--TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679 || | |||||| || ||| ||||| ||||| || | || || || | ||||| | Sbjct 193356 TGAA--TTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTG 193299 Query 225680 TCTTGCCCGTCA 225691 |||| || |||| Sbjct 193298 TCTTTCCGGTCA 193287 >seq320 Length=806987 Score = 136 bits (150), Expect = 9e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || ||||| ||||| || | || ||||||| | ||| Sbjct 609721 ACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGT 609780 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| ||||| ||||| | || || ||||| || |||||||| Sbjct 609781 ACGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACC 609840 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || ||||| ||| ||| ||||| ||||| || | ||||| || | Sbjct 609841 CTCCTTATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAG 609900 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| ||||| || ||||||||||| | ||| | ||||||| Sbjct 609901 GGTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCATT 609943 Score = 136 bits (150), Expect = 9e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| ||||| || || || || || || || || | |||||||| | | || Sbjct 609949 ACGAAGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGT 610008 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| | |||||| ||||| || |||||||| Sbjct 610009 ACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACC 610068 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| |||||||| || ||| || || |||||||| |||| || || || | Sbjct 610069 CTCCTTATCTTGGATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAG 610128 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| |||||||| || || || || | || | ||||||| Sbjct 610129 GGTGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCATT 610171 >seq98 Length=1126903 Score = 100 bits (110), Expect = 7e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 225550 GTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATA 225609 ||||| |||||||| || ||||||||||| || || | | || || || || || || Sbjct 1023249 GTTCTTCCATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATC 1023308 Query 225610 CCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCT 225669 || ||||| |||||||| || ||| ||| || || || |||||| | || || || Sbjct 1023309 CCCTCCTTATCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCTCC 1023368 Query 225670 AACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| ||||| || |||||||| || | ||| | |||||| Sbjct 1023369 AAGGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATT 1023413 >seq342 Length=727325 Score = 93.3 bits (102), Expect = 1e-13 Identities = 171/250 (68%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 193524 GCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCCGCTTGAGCGACGAGAATGTGATGC 193583 ||||| ||||||| ||||| || |||| ||| | ||| || |||||||||||| | Sbjct 60755 GCGTCCTTGTAGAGCATGAAAGGGTTGCCAGTCTCAGTTTGGGCTTCGAGAATGTGATAC 60814 Query 193584 CAAAGTTCTTGAGCTTTCACTGTCGTTCTGGC-----CTTTCCTTCCCTCTCGTACTTTT 193638 || |||| ||| ||||| | ||| | | || |||| | |||| || || | Sbjct 60815 CAGAGTTTTTGCGCTTTGATGGTCTTGCGAGCAAGGTCTTTAGTAT--TCTCATATTTGT 60872 Query 193639 CGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGACCGGGAGCTTCCTTTGGGC 193698 || || |||| || |||| || | | ||| | | ||| || ||||| || || | Sbjct 60873 TATAGAGAGCCTCGAATTCTTCACCCCAAACGTCGGCCAAACCTGGGGCTTCATTAGGAC 60932 Query 193699 AAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATGAAGAGGTCAGATGTCCAAA 193758 ||||||| ||||| || ||| || || ||||||||||| || |||| |||||| Sbjct 60933 AAAAGAGGCTCCACTCGGCATTTGCCTCAACTCTCTTCATGAATAGATCAGGGATCCAAA 60992 Query 193759 TGGCGTAGAA 193768 |||||||| Sbjct 60993 GAGCGTAGAA 61002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525118836212