Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03]
398 sequences; 124,945,702 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq344 95.1 9e-15
>seq344
Length=693110
Score = 95.1 bits (104), Expect = 9e-15
Identities = 429/673 (64%), Gaps = 34/673 (5%)
Strand=Plus/Minus
Query 27079 TCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTC 27138
||||| ||| || ||| | || || || || || || ||||||| | ||| |
Sbjct 555111 TCCACTTGCCTATTGATCTTGAGAGTAGGGAACTCCCTAGGGGCCCTCTCCAACTGCCCC 555052
Query 27139 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 27198
|||| || ||| | ||||| || || || || || |||| ||||| | ||||||
Sbjct 555051 TTCAACGCATCCGCATGATCGGCATAAACATGCGCATCCCCCATAGTGTGTATAAACTCC 554992
Query 27199 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 27258
|| || || || || || || || ||||| ||||||||| | ||| |||||
Sbjct 554991 CCAGGCTCCAGGCCACACACATGCGCAATCATTATCGTGAGGAGCGCGTACGAAGCGATA 554932
Query 27259 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCT 27318
||||| || || || |||||||| || | |||||| || | | ||| ||| |
Sbjct 554931 TTAAACGGGACACCAAGCCCCATATCACAGCTCCTCTGATACAACACACAACTCAGCGCC 554872
Query 27319 CC-ATCGCTTAC--------GTAAAACTGACATAT-----GGC------GTGGCACGGAG 27358
|| || ||| | ||| | |||||| ||| ||| ||||| |
Sbjct 554871 CCCATACCTTTCCCCTCCTTGTACGA--GACATAGAATTGGGCAAACATGTGACACGGCG 554814
Query 27359 GAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTT 27418
| | ||||| ||| || || ||||| |||| || ||||||||| | ||| |
Sbjct 554813 GCAACGCCATCTTCGCCAGATCCGCCGGATTCCAAGCGCTCATGATGATGCGGCGGTCGT 554754
Query 27419 CTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 27478
||||||||| ||| || | | ||| ||||||||||| ||| |||||||
Sbjct 554753 AGGGGTTGTTCTTGAGCTTGTATATGACGTCGGCGAGCTGATCCACGCCCTGGCCCGAGT 554694
Query 27479 AGTCTACCCT----CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTAC 27534
||| || | || ||| ||||| ||| || || |||| ||| || || |||||
Sbjct 554693 AGT---CCGTGTGGCA-GTCGACGTACTTTGCGCCAAAGTGCCGCCACTGAAATCCGTAG 554638
Query 27535 ACCGGTCCCAGGTCTCCCTCTTCCCTGTGC-TCGAAGCCC-CTCTTGTCCAAAAAGTCTC 27592
|| || |||||||| ||||| | | | | || ||||| | |||||| | | |
Sbjct 554637 ACGGGGCCCAGGTCACCCTCCGCGCGCTCCGTC--AGCCCGATGCTGTCCAGGTAAGCGC 554580
Query 27593 TGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGG 27652
|| ||||| | ||||||||||| || ||| | |||||| | | | || |
Sbjct 554579 GCGACCCGTTTCCCTCCCAGATCTTCACGCCCACGGCCGAGAGCGGGGCGTTGCTGGTCG 554520
Query 27653 ACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCG 27712
| || | |||||| || ||||| | | || ||| || |||| | ||| ||||
Sbjct 554519 AGCCCGAAATGAACCAGAGGAGCTCGTGAAGGATGGCTTTGTGGAAGAGGCGCTTTGTCG 554460
Query 27713 TGAGGAGGGGAAA 27725
| |||||||| ||
Sbjct 554459 TCAGGAGGGGGAA 554447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369505407659138
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |