Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq344 95.1 9e-15 >seq344 Length=693110 Score = 95.1 bits (104), Expect = 9e-15 Identities = 429/673 (64%), Gaps = 34/673 (5%) Strand=Plus/Minus Query 27079 TCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTC 27138 ||||| ||| || ||| | || || || || || || ||||||| | ||| | Sbjct 555111 TCCACTTGCCTATTGATCTTGAGAGTAGGGAACTCCCTAGGGGCCCTCTCCAACTGCCCC 555052 Query 27139 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 27198 |||| || ||| | ||||| || || || || || |||| ||||| | |||||| Sbjct 555051 TTCAACGCATCCGCATGATCGGCATAAACATGCGCATCCCCCATAGTGTGTATAAACTCC 554992 Query 27199 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 27258 || || || || || || || || ||||| ||||||||| | ||| ||||| Sbjct 554991 CCAGGCTCCAGGCCACACACATGCGCAATCATTATCGTGAGGAGCGCGTACGAAGCGATA 554932 Query 27259 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCT 27318 ||||| || || || |||||||| || | |||||| || | | ||| ||| | Sbjct 554931 TTAAACGGGACACCAAGCCCCATATCACAGCTCCTCTGATACAACACACAACTCAGCGCC 554872 Query 27319 CC-ATCGCTTAC--------GTAAAACTGACATAT-----GGC------GTGGCACGGAG 27358 || || ||| | ||| | |||||| ||| ||| ||||| | Sbjct 554871 CCCATACCTTTCCCCTCCTTGTACGA--GACATAGAATTGGGCAAACATGTGACACGGCG 554814 Query 27359 GAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTT 27418 | | ||||| ||| || || ||||| |||| || ||||||||| | ||| | Sbjct 554813 GCAACGCCATCTTCGCCAGATCCGCCGGATTCCAAGCGCTCATGATGATGCGGCGGTCGT 554754 Query 27419 CTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 27478 ||||||||| ||| || | | ||| ||||||||||| ||| ||||||| Sbjct 554753 AGGGGTTGTTCTTGAGCTTGTATATGACGTCGGCGAGCTGATCCACGCCCTGGCCCGAGT 554694 Query 27479 AGTCTACCCT----CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTAC 27534 ||| || | || ||| ||||| ||| || || |||| ||| || || ||||| Sbjct 554693 AGT---CCGTGTGGCA-GTCGACGTACTTTGCGCCAAAGTGCCGCCACTGAAATCCGTAG 554638 Query 27535 ACCGGTCCCAGGTCTCCCTCTTCCCTGTGC-TCGAAGCCC-CTCTTGTCCAAAAAGTCTC 27592 || || |||||||| ||||| | | | | || ||||| | |||||| | | | Sbjct 554637 ACGGGGCCCAGGTCACCCTCCGCGCGCTCCGTC--AGCCCGATGCTGTCCAGGTAAGCGC 554580 Query 27593 TGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGG 27652 || ||||| | ||||||||||| || ||| | |||||| | | | || | Sbjct 554579 GCGACCCGTTTCCCTCCCAGATCTTCACGCCCACGGCCGAGAGCGGGGCGTTGCTGGTCG 554520 Query 27653 ACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCG 27712 | || | |||||| || ||||| | | || ||| || |||| | ||| |||| Sbjct 554519 AGCCCGAAATGAACCAGAGGAGCTCGTGAAGGATGGCTTTGTGGAAGAGGCGCTTTGTCG 554460 Query 27713 TGAGGAGGGGAAA 27725 | |||||||| || Sbjct 554459 TCAGGAGGGGGAA 554447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505407659138