Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq342 141 1e-28 >seq342 Length=727325 Score = 141 bits (156), Expect = 1e-28 Identities = 351/531 (66%), Gaps = 4/531 (1%) Strand=Plus/Plus Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 ||||| | |||||||| || | || || || | | || |||| || || |||||| Sbjct 61118 ATATCCGCGTGCCATGGCTCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCC 61177 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | ||| |||||||| | |||| | ||||| |||||||| | ||| |||||||| Sbjct 61178 TGGTCAACATACCTGGCGGTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAA 61237 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 | ||||| || || | |||||| ||| | || ||||| |||| | || Sbjct 61238 CTACCATTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAGTGAATGTTGAGTCCA 61297 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 || || || || | || || || | ||| || || | |||||||| ||||| || Sbjct 61298 ATACCGCCAGCAGTTTTTGAAATCATAGCACAGGTCTTAAGGGTATCGTAAATACCATCA 61357 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG--ATGAACAGTTC 78402 || ||| | |||| ||| | |||||| || | |||| | ||| || | Sbjct 61358 ATCGAGTCCCCTTTCATAGTAACCAAGAAACAGGACGAGAGTTGAGGCGATGGT--GTGC 61415 Query 78403 CTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATG 78462 ||||||| || | || || || ||||| ||||| | ||| ||| || || |||| Sbjct 61416 CTGCATTGAAGAGAGTAGGCGAAGCATGGGTAAAATACTTTGAAGACGTGAGGTTATATG 61475 Query 78463 TTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATAT 78522 | || ||| | || | ||| | ||||||||| || || |||||||| | ||||| Sbjct 61476 TCTCGATAACCTTGTCGACATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATAT 61535 Query 78523 GCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 78582 ||||||| | ||| | || ||| || | | ||| || |||||||||| Sbjct 61536 GCTGAGGACGCTCAGCAACTTTTCCATTGATGCGAAGAAGGTACGAACGCTCCAAAGTTT 61595 Query 78583 TAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAAT 78633 | || ||||| || ||||| ||| || | ||||| ||||| |||||| Sbjct 61596 TGAAGCCAAAGTAATTGTAGTTAAAATCCTTATCGTAGATAATGGCAGAAT 61646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665344022720