Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq342 158 2e-33 >seq342 Length=727325 Score = 158 bits (174), Expect = 2e-33 Identities = 380/573 (66%), Gaps = 4/573 (1%) Strand=Plus/Plus Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717 ||||| || || |||||| | | || | ||| || | ||||| | |||||||| Sbjct 61076 TCTTCCTTGCCATGATTCTTCCTCAAGTCAATGAAATCGAATATATCCGCGTGCCATGGC 61135 Query 76718 TCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCA 76777 || | || || || | | || |||| || || |||||||| || | ||| ||||| Sbjct 61136 TCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCCTGGTCAACATACCTGGCG 61195 Query 76778 GTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAA 76837 || | |||| | ||||| |||||||| | |||||||||||| ||||||| || || | | Sbjct 61196 GTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAACTACCATTGGTCCCGGCA 61255 Query 76838 ATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTA 76897 ||||| ||| |||||||| ||| || || || || || || |||| Sbjct 61256 ATATAGGAACCAGTAGCACGAATGCAGTGAATGTTGAGTCCAATACCGCCAGCAGTTTTT 61315 Query 76898 GAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATG 76957 || || | ||||||| || | || || || || || || || || | |||| Sbjct 61316 GAAATCATAGCACAGGTCTTAAGGGTATCGTAAATACCATCAATCGAGTCCCCTTTCATA 61375 Query 76958 TTAAGAAGAAAACAGCTAGACATTTGA--TGATGAACAGTTCCTGCATTAAACAATGTAG 77015 ||| | |||||| || | |||| |||| || |||||||| || | |||| Sbjct 61376 GTAACCAAGAAACAGGACGAGAGTTGAGGCGATG--GTGTGCCTGCATTGAAGAGAGTAG 61433 Query 77016 GAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTA 77075 | || ||||| || || | ||| ||| || || ||||| || ||||| || | Sbjct 61434 GCGAAGCATGGGTAAAATACTTTGAAGACGTGAGGTTATATGTCTCGATAACCTTGTCGA 61493 Query 77076 TATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAG 77135 |||| | ||||||||| ||||| |||||||| | |||||||||||| || || || Sbjct 61494 CATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATATGCTGAGGACGCTCAGCAA 61553 Query 77136 TCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 77195 || ||| || | | ||| || ||||||||||| || ||||| || |||| Sbjct 61554 CTTTTCCATTGATGCGAAGAAGGTACGAACGCTCCAAAGTTTTGAAGCCAAAGTAATTGT 61613 Query 77196 ATGAAAAGTCTCTTTCGTAAATAATAACCGAAT 77228 | ||| || | ||||| ||||| | |||| Sbjct 61614 AGTTAAAATCCTTATCGTAGATAATGGCAGAAT 61646 Score = 102 bits (112), Expect = 1e-16 Identities = 250/375 (67%), Gaps = 7/375 (2%) Strand=Plus/Plus Query 75561 TCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG 75620 |||| |||| |||||||||| || ||| ||| |||||||||||| |||| ||| | Sbjct 59854 TCTTCTGAGAGATTTCCCAAACGGTCTTGTAAAGAGCTTTGATATCATCCGGAATATTCG 59913 Query 75621 T-ATTTTGAATGGATCC-GCCAT---CAGATATAATTGTATTCTTGATCTCATCATTCCA 75675 || || ||||| | ||||| | | || || |||||| || | ||| |||| Sbjct 59914 GGATATTC--TGGATACTGCCATTCTCCGCAATGATACGATTCTTCATGTTATCGCTCCA 59971 Query 75676 CAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGA 75735 |||| | || | | | | | | ||| || ||||||||||| || |||| Sbjct 59972 CAATCCCATGTCAACGAGATCCTTCAACAACCAAGGGTTGACAATTTGAAACTCGCCAGC 60031 Query 75736 CAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAA 75795 ||| |||| || | ||||| || |||||| || || | | | || ||| |||||| Sbjct 60032 CAAAACTCGACGGGAATAAATGTTCGAGGTATAAGGCTCAAAACACTCGTTGAATCCCAA 60091 Query 75796 AATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATG 75855 || |||| || ||||| || |||||||| ||||| | | ||| | ||| || || Sbjct 60092 GATCTGAGAGGTCGAAGCGGTGGGCATAGGAGCCACAAGAAGGGAATTACGGAGGCCGTG 60151 Query 75856 TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCA 75915 || ||| || ||||| | | | ||||||||| | || | || |||| ||| Sbjct 60152 CTTTTTGACCTTCTCTTTCAACTCATCCCAATCCCACAATTCAGTGGGGGTGACATTCCA 60211 Query 75916 GAGATCGTATTGTAG 75930 |||||| ||||| || Sbjct 60212 GAGATCATATTGAAG 60226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930853151360