Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq383 109 1e-18 seq320 100 7e-16 seq98 100 7e-16 seq342 91.5 3e-13 >seq383 Length=466833 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || ||||||||||| || |||||||| |||| | ||||| |||||| Sbjct 193476 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCT 193417 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || ||||| || || || | ||||| || | | || || ||||| ||| Sbjct 193416 TCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCT 193357 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||||||| | || | |||| ||| ||| ||||||||||| || || Sbjct 193356 TGAATTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTGTC 193297 Query 152073 TTGCCCGT 152080 || || || Sbjct 193296 TTTCCGGT 193289 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| |||||||| || ||||| || || | || || Sbjct 193704 AGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCC 193645 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| || |||||||||||||| | ||| ||||| | | ||| |||||||| || Sbjct 193644 TCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCC 193585 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | | || ||| ||| || || |||||||||||| Sbjct 193584 TGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTT 193525 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || || || | |||||| Sbjct 193524 TTACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||||||||| ||||||||||| ||||| || || |||| | ||| | ||||||| Sbjct 193184 AGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCCATCT 193125 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| |||||||| || | | ||||||||| | | || ||||| || ||| Sbjct 193124 TCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCTTTGTCT 193065 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | | |||| || ||| || || | ||| || || Sbjct 193064 TGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACCTCCAAAGTGATGGTC 193005 Query 152073 TTGCCCGT 152080 || || || Sbjct 193004 TTTCCGGT 192997 >seq320 Length=806987 Score = 100 bits (110), Expect = 7e-16 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||||| |||||||| |||||||| || || ||||||||||| | | || | Sbjct 609953 AGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTACGG 610012 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 ||||| || || ||||| || |||||||| | | |||||||| | | || || | Sbjct 610013 CCATCCTCAAGCTGCTTT--CCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCT 610070 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| ||||| ||||| ||||| | || | | |||| || ||| || || || | Sbjct 610071 CCTTATCTTGGATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGG 610130 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || ||||| || | ||||| || |||| |||||| Sbjct 610131 TGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCATT 610171 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||||||||| |||||||| ||||||||||||||||| | | || | || || Sbjct 610469 GAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCCGTC 610528 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| || || ||||| | | ||||| || | | ||||| ||||| Sbjct 610529 CTCAAGCTGCTTT--CCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTG 610586 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || ||||| || ||||| | || | |||| || || || ||||| ||||| Sbjct 610587 TCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATG 610646 Query 152070 GTTTTGCCCGTGA 152082 ||||| || |||| Sbjct 610647 GTTTTTCCAGTGA 610659 >seq98 Length=1126903 Score = 100 bits (110), Expect = 7e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 151941 GTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000 ||||| |||||||| || ||||| || || || | ||||||||| |||| | ||| Sbjct 1023249 GTTCTTCCATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATC 1023308 Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060 || ||||| ||||| ||||| |||||| | || | | ||||| |||||||| || Sbjct 1023309 CCCTCCTTATCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCTCC 1023368 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || || || || || | |||||||||||| | ||||||| Sbjct 1023369 AAGGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATT 1023413 >seq342 Length=727325 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 115617 GCAAGGGAGATTTTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCA 115676 ||||| || | ||||| || |||||| ||||||| || |||||| |||| ||||| Sbjct 61014 GCAAGAGATTTGTTCTACGCTCTTTGGATCCCTGATCTATTCATGAAGAGAGTTGAGGCA 60955 Query 115677 AACGGAATGTGGAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGT 115736 || | |||||||||||||||||| ||||||||||| ||| | | || |||| ||| Sbjct 60954 AATGCCGAGTGGAGCCTCTTTTGTCCTAATGAAGCCCCAGGTTTGGCCGACGTTTGGGGT 60895 Query 115737 CCAGAGTTTGAGAATCTTTA 115756 ||| || ||| ||| || Sbjct 60894 GAAGAATTCGAGGCTCTCTA 60875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153814916235058