Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq383 102 7e-17 >seq383 Length=466833 Score = 102 bits (112), Expect = 7e-17 Identities = 166/238 (70%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| |||||||||||||| | || || ||||||||||| ||||| ||| | | Sbjct 193721 ATGCAGATTTTTGTCAAAACCCTTACTGGAAAAACCATTACTTTGGAAGTCGAATCTTCC 193780 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | | || || ||||| || || || || | ||| |||||| Sbjct 193781 GATACTATTGACAACGTCAAGGGTAAAATCCAGGATAAGGAGGGTATCCCCCCAGATCAA 193840 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | ||||| | ||| || || || ||||| ||| ||| || ||| |||||| Sbjct 193841 CAACGTCTTATCTTTGCTGGTAAGCAGTTGGAGGATGGACGTACTTTGAGCGACTATAAT 193900 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA-ATAAATAA 111336 || ||||| || || || ||||| || || | ||||| || ||||| | ||||||| Sbjct 193901 ATCCAAAAGGAGTCAACTCTACACTTGGTTCTCCGTCTTCGTGGTGGTATGTAAATAA 193958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421809153952048