Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq320 163 6e-35 seq383 156 9e-33 seq287 113 9e-20 seq98 100 6e-16 seq340 98.7 2e-15 seq349 95.1 3e-14 >seq320 Length=806987 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| || ||||| | || || || || |||||||| |||| Sbjct 609944 CCACCACGAAGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAG 610003 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || || || || |||||||| ||||| ||||| ||| Sbjct 610004 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGA 610063 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| |||||||| || | || ||| | || || |||||||| | ||||| Sbjct 610064 ATACCCTCCTTATCTTGGATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACC 610123 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||| ||||| ||||| || || || ||||| || || || |||||| Sbjct 610124 TCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCATT 610171 Score = 156 bits (172), Expect = 9e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282870 GAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCA 282929 || || ||||| || ||||| |||| || | ||| ||||| || ||||| || || Sbjct 609713 GACCCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCG 609772 Query 282930 GCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCC 282989 | ||| || || |||||||| | || || || ||||||||||| || || ||||| Sbjct 609773 GAAAGAGTACGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGA 609832 Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||||||||||||| || || ||||| | || || | ||||| ||||| |||| || Sbjct 609833 GGAATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCC 609892 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||| ||||| ||||| || |||||||| |||||||| || |||||| Sbjct 609893 ACCTCGAGGGTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCATT 609943 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || ||||| | || || |||||||||||||| || | Sbjct 610454 ACCGCCACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGA 610513 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || ||||||||||||||||| || || || Sbjct 610514 GAGGGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGG 610573 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || ||| | |||||||||||||| | ||| || Sbjct 610574 AATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCAC 610633 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || || || || || || || Sbjct 610634 CTCAAGGGTAATGGTTTTTCCAGT 610657 >seq383 Length=466833 Score = 156 bits (172), Expect = 9e-33 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| || || || | || ||||| || ||||||||||| | Sbjct 193492 ACCACCTCGCAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGA 193433 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | |||||| || | ||| || |||||||| |||| |||||| || || || Sbjct 193432 GAGGGTTCTGCCATCTTCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGG 193373 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||| || || |||| || ||||||| |||||||||| ||||| Sbjct 193372 AATGCCCTCCTTGTCTTGAATTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGAC 193313 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 ||| |||||||| ||||| || |||| Sbjct 193312 TTCAAGAGTGATTGTCTTTCCGGTCA 193287 Score = 129 bits (142), Expect = 1e-24 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| |||||||| || || || ||||| | || ||||| ||||| || ||||| | Sbjct 193200 ACCGCCACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGA 193141 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| || || ||||| ||||| || |||||||| || ||||| || Sbjct 193140 GAGAGTGCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGG 193081 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || || |||||||||||| ||||| || || | ||||| |||||||| | || | Sbjct 193080 AATCCCTTCTTTGTCTTGGATC-TTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAA 193022 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | || | |||||| ||||| || || Sbjct 193021 CCTCCAAAGTGATGGTCTTTCCGGT 192997 Score = 123 bits (136), Expect = 5e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| |||| || || |||||||| || ||||| Sbjct 193948 ACCACCACGAAGACGGAGAACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCGCT 193889 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || |||||||| | || || || |||||||| | ||||||||| || || Sbjct 193888 CAAAGTACGTCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGGGG 193829 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| || ||||| || | || ||| | || ||||| || |||| |||||| Sbjct 193828 GATACCCTCCTTATCCTGGATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATTCGAC 193769 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || || || || || | || || || || |||||||| Sbjct 193768 TTCCAAAGTAATGGTTTTTCCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 >seq287 Length=845177 Score = 113 bits (124), Expect = 9e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || ||||| | ||||| || || |||||||||||||| | Sbjct 368608 ACCACCACGAAGGCGGAGGACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 368667 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| || ||||| || || ||||| || ||||||||||| ||||| || || Sbjct 368668 AAGGGTGCGACCGTCCTCAAGCTGCTTCCCAGCGAAGATCAAACGCTGTTGATCTGGGGG 368727 Query 282992 AATACCCTCCTTGTC 283006 ||| || ||||| || Sbjct 368728 AATTCCTTCCTTATC 368742 >seq98 Length=1126903 Score = 100 bits (110), Expect = 6e-16 Identities = 122/161 (76%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || ||||| ||||| ||||| ||||| | || || || || || |||||| Sbjct 1023255 CCATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATCCCCTCC 1023314 Query 283002 TTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAG 283059 || |||||||| |||||| || || | || || || || || ||| || || || | | Sbjct 1023315 TTATCTTGGAT-TTTGCTCTTGACATTGTCAATTGTATCTGA-GCTCTCTACCTCCAAGG 1023372 Query 283060 TGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 |||| ||||| || ||||||||||| ||||| ||||||||| Sbjct 1023373 TGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATT 1023413 >seq340 Length=732193 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 230205 GACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAA 230264 || ||| ||||||| |||| | |||||||| || | |||||| ||| ||||| ||| Sbjct 107570 GAAGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCTAAGCTCATGAAGCAGTATATTGAA 107511 Query 230265 TTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAAC 230324 || || || || ||| || | || | || || || || | || || ||| ||| Sbjct 107510 TTTGTTGCCGACCGTCTTCTGTTGTCTCTCGGTAACCCAAAGTTTTACAATGCCACTAAC 107451 Query 230325 CCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGT 230384 || |||| ||||||||| ||||| || || ||||| ||||||||||| |||||| Sbjct 107450 CCATTCGACTTTATGGAGTCTATTTCTCTTGCCGGCAAAACCAACTTCTTCGAGAAGCGT 107391 Query 230385 GTCAGCGATTATCA 230398 ||| | || ||||| Sbjct 107390 GTCGGAGACTATCA 107377 >seq349 Length=649591 Score = 95.1 bits (104), Expect = 3e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 ||||||||||||||||||| | ||| || | ||||||||||| || || ||||| |||| Sbjct 305983 CTTTTTGGATGTTGTAGTCCGAAAGGGTCCTTCCATCCTCTAGCTGCTTTCCGGCGAAGA 306042 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTC 283006 ||||||| || ||||| || || ||||||||||| Sbjct 306043 TCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTC 306079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733862284292