Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq320 125 5e-24 seq383 104 2e-17 seq287 104 2e-17 >seq320 Length=806987 Score = 125 bits (138), Expect = 5e-24 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || ||||||||||||||||||||| | ||| ||| |||| || Sbjct 610473 ACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCCGTCCTCA 610532 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||||||| |||||||||| ||| | || ||||| ||| Sbjct 610533 AGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGA 610592 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | ||||||||||| | ||||| || ||| Sbjct 610593 ATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATGGTTTTT 610652 Query 44309 CCCGTGA 44315 || |||| Sbjct 610653 CCAGTGA 610659 Score = 123 bits (136), Expect = 2e-23 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| ||| || || ||||| ||||||| || || | || ||| Sbjct 609734 ACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTCC 609793 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || ||||||||||| |||||||| |||| ||| | ||| ||||| ||| Sbjct 609794 AACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGA 609853 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | || ||||| | || |||||||| | || || |||| Sbjct 609854 ATCTTCGACTTGACATTGT--CGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCT 609911 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || | || || ||||| |||||||| Sbjct 609912 TTCCGGTCAAAGTTTTAACGAAAATTTGCAT 609942 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | |||| | || || ||||| || |||||| || |||||||| Sbjct 609937 TTGCATTCCACCACGAAGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTA 609996 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | ||| || | || || |||||||| || || |||||||| || ||||| || Sbjct 609997 ATCAGAGAGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTC 610056 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | ||| ||||| || || ||| ||| | | | |||||||| | ||| Sbjct 610057 TGGAGGAATACCCTCCTTATCTTGGATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGA 610116 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || ||||| || || | |||||| || ||||||||||| Sbjct 610117 CTCGACCTCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 610170 >seq383 Length=466833 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || || || ||||| || ||| || ||||| || || || Sbjct 193203 CATACCGCCACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTC 193144 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| |||| | || || ||||| || ||||| || |||||||||||||| |||| Sbjct 193143 GGAGAGAGTGCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGG 193084 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||| || || ||||| ||||| | | |||||||| | ||| || Sbjct 193083 AGGAATCCCTTCTTTGTCTTGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTC 193024 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGT 44313 ||||||| || || |||||||| || Sbjct 193023 AACCTCCAAAGTGATGGTCTTTCCGGT 192997 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| ||| | | || ||||| || || |||||||||||| || ||||| Sbjct 193723 CATACCACCTCGCAGACGAAGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATC 193664 Query 44167 -GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | || | || |||| || |||||||| ||||| ||||| | ||||| || |||| Sbjct 193663 ACTCAAGGT-ACGACCGTCCTCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTG 193605 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| ||||| | | || || || | || | Sbjct 193604 GGGGGATGCCTTCCTTATCCTGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACT 193545 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | ||||| || || || || ||||| || || || || ||||| Sbjct 193544 CGACCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||||||||| || || ||| | || | || ||| Sbjct 193929 ACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTCAAAGTACGTCCATCCTCC 193870 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || |||||||| | ||| || ||||||| || | ||| ||||| ||| Sbjct 193869 AACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGGATACCCTCCTTATCCTGG 193810 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || ||| | | | || || |||| ||||| || |||| ||||| || ||| Sbjct 193809 ATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATTCGACTTCCAAAGTAATGGTTTTT 193750 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| || || || || ||||| Sbjct 193749 CCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 >seq287 Length=845177 Score = 104 bits (114), Expect = 2e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| ||||||||||| ||||||||||| || | || ||| |||| || Sbjct 368627 ACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCCTCA 368686 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 ||||||||||| || |||||||||||||| ||||||| || | |||||||| ||| Sbjct 368687 AGCTGCTTCCCAGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTATCC 368743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988653821566