Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq320 156 1e-32 seq383 145 2e-29 seq98 105 2e-17 seq349 104 6e-17 >seq320 Length=806987 Score = 156 bits (172), Expect = 1e-32 Identities = 160/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| |||||| | || ||||| || ||||||||||||||||| || ||| Sbjct 609939 CAAATTTTCGTTAAAACTTTGACCGGAAAGACTATCACCCTCGAGGTGGAGTCTTCTGAC 609880 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||||||||| || || || || ||||| |||||||| Sbjct 609879 ACAATCGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAGCAG 609820 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||| | || ||||| | |||||| ||||||||||| | Sbjct 609819 CGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGTACTCTTTCCGATTATAACATT 609760 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || ||||| || || || || |||| || Sbjct 609759 CAGAAAGAGTCCACCCTTCA-CTTGGTT 609733 Score = 154 bits (170), Expect = 4e-32 Identities = 147/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| |||||||| || ||||| ||||||||| || ||||| ||||| |||||||| Sbjct 610659 TCACTGGAAAAACCATTACCCTTGAGGTGGAATCGTCGGACACTATCGACAACGTCAAGT 610600 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || ||||| ||||| || |||||||| | ||||| || |||| Sbjct 610599 CTAAGATTCAGGACAAGGAGGGAATTCCTCCAGATCAGCAACGTTTGATCTTTGCTGGAA 610540 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || || ||| | || || | ||||| ||| ||||||| || || || || | Sbjct 610539 AGCAGCTTGAGGACGGACGCACCCTCTCAGATTACAACATCCAAAAGGAGTCTACCCTTC 610480 Query 178123 ATCTTGTT 178130 |||||||| Sbjct 610479 ATCTTGTT 610472 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || || |||||||||||||| || ||| ||| Sbjct 610167 CAAATCTTTGTCAAGACCTTAACCGGCAAGACAATCACCCTCGAGGTCGAGTCCTCGGAC 610108 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| || || || || || || || || ||||| ||||||||| Sbjct 610107 ACCATTGACAACGTCAAGTCGAAAATCCAAGATAAGGAGGGTATTCCTCCAGACCAGCAA 610048 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| ||||| ||||| || ||||| | || || | ||||| ||| | Sbjct 610047 CGATTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTCTCTGATTACAACATT 609988 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 609987 CAGAAGGAGTCTACCCTTCATCTCGT 609962 Score = 118 bits (130), Expect = 3e-21 Identities = 139/187 (74%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || ||||||||||||||||| || || || || || || ||||| | Sbjct 610374 ACTGGCAAGACAATCACCCTCGAGGTGGAGTCTTCTGATACTATTGACAATGTCAAGTCA 610315 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| ||||| || || || ||||| || |||||||| || | || |||||||| || Sbjct 610314 AAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAGCAGCGCTTGATTTTCGCCGGCAAG 610255 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || || || ||||| | || ||| ||||||||||| | || ||||| || || || || Sbjct 610254 CAACTTGAGGATGGTCGTACCCTTTCCGATTATAACATTCAGAAAGAGTCCACCCTTCA- 610196 Query 178125 CTTGTTT 178131 |||| || Sbjct 610195 CTTGGTT 610189 >seq383 Length=466833 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || ||||| || ||||| | ||||| || ||| ||||||||||| || || || Sbjct 192997 ACCGGAAAGACCATCACTTTGGAGGTTGAGTCCTCGGACACCATCGACAATGTGAAGAGC 193056 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| || ||||||||||| || ||||| |||||||| || | || |||||||| ||| Sbjct 193057 AAGATCCAAGACAAAGAAGGGATTCCTCCAGACCAGCAGCGTTTGATTTTCGCCGGTAAA 193116 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||||||||| | ||||| |||| ||||| |||| ||||| || || || ||| Sbjct 193117 CAGCTCGAAGATGGGCGCACTCTCTCCGACTATAATATCCAGAAAGAGTCTACCCTTCAT 193176 Query 178125 CTTGT 178129 ||||| Sbjct 193177 CTTGT 193181 Score = 132 bits (146), Expect = 1e-25 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||| || || || ||||| || || |||||||| || || || Sbjct 193496 CAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCGGAT 193555 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||||||||| || ||||| ||||| || ||||| || Sbjct 193556 ACGATCGACAACGTGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAACAG 193615 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || |||||||||||||| || ||||| || || || | || |||| |||||||| | Sbjct 193616 CGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTAC-CTTGAGTGATTATAATAT 193674 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 |||||| || || || || || ||||| Sbjct 193675 CCAAAAGGAGTCGACCCTCCACCTTGT 193701 >seq98 Length=1126903 Score = 105 bits (116), Expect = 2e-17 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||| | || || || || |||||| | ||||| || |||||||| Sbjct 1023409 CAGATTTTCGTGAAGACTTTGACCGGGAAGACCATCACCTTGGAGGTAGAGAGCTCAGAT 1023350 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| || || || || || || || ||||||||||| ||||| Sbjct 1023349 ACAATTGACAATGTCAAGAGCAAAATCCAAGATAAGGAGGGGATCCCTCCGGATCAGCAG 1023290 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGAC 178084 | | || || || || || || |||||||||||||| || Sbjct 1023289 AGGTTGATATTTGCTGGGAAGCAACTCGAAGATGGAAGAAC 1023249 >seq349 Length=649591 Score = 104 bits (114), Expect = 6e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 178012 AGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCG 178071 ||||||| || |||||||| || |||||||| || | |||||||||||||| ||||| | Sbjct 306081 AGGACAAGGAGGGAATCCCCCCAGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTAG 306022 Query 178072 AAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAAT 178113 | ||||||||||| ||| | || || ||| ||||||||| || Sbjct 306021 AGGATGGAAGGACCCTTTCGGACTACAACATCCAAAAAGTAT 305980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725061723212