Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 3e-16
>seq1
Length=10671843
Score = 100 bits (110), Expect = 3e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
||||| || |||||||| ||| ||| | |||||||| ||||||||||| |||||
Sbjct 3822941 ATATATGTGTCGATGAGAAGGGAGTAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 3822882
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| |||||||| || || | |||||||||||| | ||| || || ||||
Sbjct 3822881 AAACCGTAGAAGCATCGTGCCTCAGGTATTTGAACTTCGCCACTGAAGCGCTCAACTAGG 3822822
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
|| ||||| ||||| || || || || ||||| ||
Sbjct 3822821 TTCTCGTTGACGATACCATCTGATGCAGCAAAAAAGGC 3822784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545554714760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |