Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014- 04-02] 7 sequences; 34,812,353 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 6e-11 >seq2 Length=7009248 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || ||||| | ||| || | ||| || ||||| ||||| ||||||||||| |||| Sbjct 3059403 TCCACCACGTAGACGAAGGACAAGGTGGAGGGTTGACTCTTTCTGAATGTTGTAATCGGA 3059344 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| | | ||| |||| || ||||| ||| | || || | ||||||||| || Sbjct 3059343 AAGTGTCCTCCCATCCTCCAGCTGCTTGCCGGCAAATATGAGACGCTGTTGATCCGGTGG 3059284 Query 18218 CACGCCTTCCTTATC 18232 | |||||| ||||| Sbjct 3059283 GATGCCTTCTTTATC 3059269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343967637215