Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 4e-24
>seq1
Length=10671843
Score = 127 bits (140), Expect = 4e-24
Identities = 152/206 (74%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 101870 TGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGCGGAACTAATTGTTGCCTTT 101926
|||||||| || ||||| ||| || ||| | || || ||| ||||||||||
Sbjct 3823065 TGGGCTATCAAATGGATCCAAGATAAGAACTCTACCTTTGCTCAACGCCTTGTTGCCTTC 3823124
Query 101927 GCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAAC 101986
||||| ||||| || ||||||||||| ||| | ||||| ||||| |||||| | |||||
Sbjct 3823125 GCTGCTGTTGAGGGTATCTTCTTTAGCGGTTCTTTCGCTTCCATCTTCTGGCTTAAGAAG 3823184
Query 101987 AGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTT 102046
| ||| || |||| ||||| |||| ||| || || | || ||| | ||||| ||||||
Sbjct 3823185 CGCGGTCTTATGCCGGGTCTGACCTTCTCAAACGAACTTATCTCTCGCGACGAGGGTCTT 3823244
Query 102047 CATCGCGACTTTGCATGCATGCTGTT 102072
||| ||||| || ||| | || ||
Sbjct 3823245 CATACTGACTTCGCCTGCCTCCTCTT 3823270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583911246685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |