Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 4e-14
>seq1
Length=10671843
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719
|| || || ||| |||||| ||||| || | | |||||||||||||| || || |
Sbjct 3823261 CAGGCGAAGTCAGTATGAAGACCCTCGTCGCGAGAGATAAGTTCGTTTGAGAAGGTCAGA 3823202
Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779
|| ||||| | || || || || | ||| || || | |||||| || ||| ||||||
Sbjct 3823201 CCCGGCATAAGACCGCGCTTCTTAAGCCAGAAGATGGAAGCGAAAGAACCGCTAAAGAAG 3823142
Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839
|| |||||||| ||||| || || | || |||| |||| | | || || | |
Sbjct 3823141 ATACCCTCAACAGCAGCGAAGGCAACAAGGCGTTGAGCAAAGGTAGAGTTCTTATCTTGG 3823082
Query 13840 ATCCATTTTCTAGCCCATTCAGATTTTTT 13868
|||||||| ||||||| || | ||| ||
Sbjct 3823081 ATCCATTTGATAGCCCAGTCGGCTTTCTT 3823053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588758123480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |